RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 RPL13AP40429 203 aaKnown RBP14.35□□□□□ -0.11
RAB5A-201ENST00000273047 CSNK1G2-AS1Q8NCQ2 148 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 LINC01600Q96MT4 127 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 TRBV10-2A0A0K0K1G8 114 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 TRIAP1O43715 76 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 TTC32Q5I0X7 151 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 ADAMTSL4-AS1Q5T5F5 129 aa14.35□□□□□ -0.11
RAB5A-201ENST00000273047 TRAV8-4A0A0B4J246 113 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 TINCRA0A1B0GVN0 87 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 CCDC179H3BU77 68 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 IFITM1P13164 125 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 RPL36AP83881 106 aaKnown RBP14.34□□□□□ -0.11
RAB5A-201ENST00000273047 RPL36ALQ969Q0 106 aaKnown RBP14.34□□□□□ -0.11
RAB5A-201ENST00000273047 IGHV1-58A0A0C4DH39 117 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 TRBV30A0A0K0K1B3 111 aa14.34□□□□□ -0.11
RAB5A-201ENST00000273047 PF4P02776 101 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 TRAV13-1A0A0B4J241 112 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 INAFM1C9JVW0 142 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 PRSS2P07478 247 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 Q6Q795 121 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 NDUFA12Q9UI09 145 aa14.33□□□□□ -0.12
RAB5A-201ENST00000273047 DAND5Q8N907 189 aa14.32□□□□□ -0.12
RAB5A-201ENST00000273047 C15orf53Q8NAA6 179 aa14.32□□□□□ -0.12
RAB5A-201ENST00000273047 UBE2WQ96B02 151 aa14.31□□□□□ -0.12
RAB5A-201ENST00000273047 LITAFQ99732 161 aa14.31□□□□□ -0.12
RAB5A-201ENST00000273047 DAZ2Q13117 558 aaKnown RBP14.3□□□□□ -0.12
RAB5A-201ENST00000273047 C16orf74Q96GX8 76 aa14.3□□□□□ -0.12
RAB5A-201ENST00000273047 ZNF625Q96I27 306 aaPredicted RBP14.29□□□□□ -0.12
RAB5A-201ENST00000273047 LINC00242Q5T6M2 205 aa14.29□□□□□ -0.12
RAB5A-201ENST00000273047 C2orf82Q6UX34 121 aa14.29□□□□□ -0.12
RAB5A-201ENST00000273047 A0A0U1RRA0 63 aa14.28□□□□□ -0.12
RAB5A-201ENST00000273047 TMEM101Q96IK0 257 aa14.28□□□□□ -0.12
RAB5A-201ENST00000273047 H7C423 109 aa14.28□□□□□ -0.12
RAB5A-201ENST00000273047 DEFB130BP0DP73 79 aa14.28□□□□□ -0.12
RAB5A-201ENST00000273047 DEFB130AP0DP74 79 aa14.28□□□□□ -0.12
RAB5A-201ENST00000273047 TRGV4A0A0C4DH28 118 aa14.27□□□□□ -0.13
RAB5A-201ENST00000273047 ICOSQ9Y6W8 199 aa14.27□□□□□ -0.13
RAB5A-201ENST00000273047 TRBV10-1A0A0K0K1A3 114 aa14.26□□□□□ -0.13
RAB5A-201ENST00000273047 DAZ4Q86SG3 579 aaKnown RBP14.26□□□□□ -0.13
RAB5A-201ENST00000273047 LINC00482Q8N8I6 264 aa14.26□□□□□ -0.13
RAB5A-201ENST00000273047 DAZ3Q9NR90 486 aaKnown RBP14.26□□□□□ -0.13
RAB5A-201ENST00000273047 TEP1Q99973 2627 aaKnown RBP14.26□□□□□ -0.13
RAB5A-201ENST00000273047 IGKV3OR2-268A0A0C4DH90 116 aa14.26□□□□□ -0.13
RAB5A-201ENST00000273047 CMC4P56277 68 aaPredicted RBP14.25□□□□□ -0.13
RAB5A-201ENST00000273047 FAM110AQ9BQ89 295 aa14.23□□□□□ -0.13
RAB5A-201ENST00000273047 CDC42SE2Q9NRR3 84 aa14.23□□□□□ -0.13
RAB5A-201ENST00000273047 H3BT86 120 aa14.22□□□□□ -0.13
RAB5A-201ENST00000273047 CLEC2BQ92478 149 aa14.22□□□□□ -0.13
RAB5A-201ENST00000273047 FHL2Q14192 279 aa14.22□□□□□ -0.13
RAB5A-201ENST00000273047 SPANXDQ9BXN6 97 aa14.22□□□□□ -0.13
RAB5A-201ENST00000273047 SPANXCQ9NY87 97 aa14.22□□□□□ -0.13
RAB5A-201ENST00000273047 UBE2L6O14933 153 aa14.21□□□□□ -0.13
RAB5A-201ENST00000273047 OVOL2Q9BRP0 275 aa14.21□□□□□ -0.13
RAB5A-201ENST00000273047 DEFB4AO15263 64 aa14.21□□□□□ -0.13
RAB5A-201ENST00000273047 COX6CP09669 75 aa14.21□□□□□ -0.13
RAB5A-201ENST00000273047 TIRAPP58753 221 aa14.21□□□□□ -0.13
RAB5A-201ENST00000273047 IGLV5-45A0A087WSX0 123 aa14.2□□□□□ -0.14
RAB5A-201ENST00000273047 Q9H8V8 135 aa14.2□□□□□ -0.14
RAB5A-201ENST00000273047 TMEM243Q9BU79 118 aa14.2□□□□□ -0.14
RAB5A-201ENST00000273047 MRPL23Q16540 153 aaKnown RBP14.19□□□□□ -0.14
RAB5A-201ENST00000273047 MIAQ16674 131 aa14.19□□□□□ -0.14
RAB5A-201ENST00000273047 SMIM1B2RUZ4 78 aa14.19□□□□□ -0.14
RAB5A-201ENST00000273047 HERVK_113P63121 156 aa14.19□□□□□ -0.14
RAB5A-201ENST00000273047 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
RAB5A-201ENST00000273047 LST1O00453 97 aa14.18□□□□□ -0.14
RAB5A-201ENST00000273047 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
RAB5A-201ENST00000273047 A0A096LPF7 62 aa14.18□□□□□ -0.14
RAB5A-201ENST00000273047 DEFB121Q5J5C9 76 aa14.17□□□□□ -0.14
RAB5A-201ENST00000273047 SMIM20Q8N5G0 67 aa14.17□□□□□ -0.14
RAB5A-201ENST00000273047 CSDC2Q9Y534 153 aaKnown RBP14.16□□□□□ -0.14
RAB5A-201ENST00000273047 FAM240AA0A1B0GVK7 77 aa14.16□□□□□ -0.14
RAB5A-201ENST00000273047 MEIG1Q5JSS6 88 aa14.15□□□□□ -0.14
RAB5A-201ENST00000273047 IGLV5-39A0A0G2JS06 123 aa14.15□□□□□ -0.14
RAB5A-201ENST00000273047 NDUFA1O15239 70 aa14.15□□□□□ -0.14
RAB5A-201ENST00000273047 CHCHD5Q9BSY4 110 aa14.15□□□□□ -0.14
RAB5A-201ENST00000273047 X6R8D5 127 aa14.14□□□□□ -0.15
RAB5A-201ENST00000273047 FLNBO75369 2602 aaKnown RBP14.14□□□□□ -0.15
RAB5A-201ENST00000273047 F5H768 121 aa14.14□□□□□ -0.15
RAB5A-201ENST00000273047 HERV-K104P63124 156 aa14.14□□□□□ -0.15
RAB5A-201ENST00000273047 DEFB135Q30KP9 77 aa14.13□□□□□ -0.15
RAB5A-201ENST00000273047 TRBV6-8A0A0A6YYG3 113 aa14.13□□□□□ -0.15
RAB5A-201ENST00000273047 TRBV7-7A0A0K0K1E9 115 aa14.11□□□□□ -0.15
RAB5A-201ENST00000273047 SHISA2Q6UWI4 295 aa14.11□□□□□ -0.15
RAB5A-201ENST00000273047 PRIMA1Q86XR5 153 aa14.11□□□□□ -0.15
RAB5A-201ENST00000273047 GYPEP15421 78 aa14.11□□□□□ -0.15
RAB5A-201ENST00000273047 TOMM7Q9P0U1 55 aa14.1□□□□□ -0.15
RAB5A-201ENST00000273047 SOSTDC1Q6X4U4 206 aa14.09□□□□□ -0.15
RAB5A-201ENST00000273047 FAM222AQ5U5X8 452 aa14.09□□□□□ -0.15
RAB5A-201ENST00000273047 FAM19A3Q7Z5A8 133 aa14.09□□□□□ -0.15
RAB5A-201ENST00000273047 CLPSL2Q6UWE3 100 aa14.08□□□□□ -0.15
RAB5A-201ENST00000273047 TIMM17BO60830 172 aa14.08□□□□□ -0.16
RAB5A-201ENST00000273047 LINC00308Q8TCZ7 52 aa14.08□□□□□ -0.16
RAB5A-201ENST00000273047 F8P00451 2351 aa14.08□□□□□ -0.16
RAB5A-201ENST00000273047 ANK2Q01484 3957 aa14.07□□□□□ -0.16
RAB5A-201ENST00000273047 CIRBPQ14011 172 aaKnown RBP14.06□□□□□ -0.16
RAB5A-201ENST00000273047 C3orf56Q8N813 242 aa14.06□□□□□ -0.16
RAB5A-201ENST00000273047 C9orf66Q5T8R8 295 aa14.06□□□□□ -0.16
RAB5A-201ENST00000273047 C5orf38Q86SI9 138 aa14.06□□□□□ -0.16
RAB5A-201ENST00000273047 PKD1L1Q8TDX9 2849 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms