RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TRAV13-1A0A0B4J241 112 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 CCL25O15444 150 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 RBX1P62877 108 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 BATFQ16520 125 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 CASC10Q5T4H9 136 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
COPS3-201ENST00000268717 LYSTQ99698 3801 aa10.57□□□□□ -0.72
COPS3-201ENST00000268717 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
COPS3-201ENST00000268717 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
COPS3-201ENST00000268717 TMEM262E9PQX1 116 aa10.56□□□□□ -0.72
COPS3-201ENST00000268717 COX6A2Q02221 97 aa10.56□□□□□ -0.72
COPS3-201ENST00000268717 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
COPS3-201ENST00000268717 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
COPS3-201ENST00000268717 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
COPS3-201ENST00000268717 ORAOV1Q8WV07 137 aa10.55□□□□□ -0.72
COPS3-201ENST00000268717 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
COPS3-201ENST00000268717 TM2D2Q9BX73 214 aa10.55□□□□□ -0.72
COPS3-201ENST00000268717 TENM2Q9NT68 2774 aa10.54□□□□□ -0.72
COPS3-201ENST00000268717 TRAV10A0A0B4J240 114 aa10.54□□□□□ -0.72
COPS3-201ENST00000268717 SPINK8P0C7L1 97 aa10.54□□□□□ -0.72
COPS3-201ENST00000268717 ZFAND6Q6FIF0 208 aa10.54□□□□□ -0.72
COPS3-201ENST00000268717 SPANXB1Q9NS25 103 aaPredicted RBP10.54□□□□□ -0.72
COPS3-201ENST00000268717 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
COPS3-201ENST00000268717 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
COPS3-201ENST00000268717 SMIM1B2RUZ4 78 aa10.53□□□□□ -0.72
COPS3-201ENST00000268717 CEND1Q8N111 149 aa10.53□□□□□ -0.72
COPS3-201ENST00000268717 RYR3Q15413 4870 aa10.53□□□□□ -0.72
COPS3-201ENST00000268717 A6NDN8 102 aa10.52□□□□□ -0.73
COPS3-201ENST00000268717 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 SS18Q15532 418 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 LINC01561Q8N1V8 128 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 C15orf53Q8NAA6 179 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
COPS3-201ENST00000268717 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
COPS3-201ENST00000268717 A0A087WZ39 114 aa10.5□□□□□ -0.73
COPS3-201ENST00000268717 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
COPS3-201ENST00000268717 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
COPS3-201ENST00000268717 NDUFA1O15239 70 aa10.49□□□□□ -0.73
COPS3-201ENST00000268717 GCSHP23434 173 aa10.49□□□□□ -0.73
COPS3-201ENST00000268717 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
COPS3-201ENST00000268717 TMEM238C9JI98 176 aa10.48□□□□□ -0.73
COPS3-201ENST00000268717 IGKV3OR2-268A0A0C4DH90 116 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 A0A1B0GV90 55 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 TIMM17BO60830 172 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
COPS3-201ENST00000268717 FXYD2P54710 66 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 REG3AQ06141 175 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 LINC00269Q8N2A0 174 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 SRSF9Q13242 221 aaKnown RBP eCLIP10.47□□□□□ -0.73
COPS3-201ENST00000268717 Q6ZVH6 145 aa10.47□□□□□ -0.73
COPS3-201ENST00000268717 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
COPS3-201ENST00000268717 A6NJY4 79 aa10.46□□□□□ -0.74
COPS3-201ENST00000268717 PTTG1IPP53801 180 aa10.46□□□□□ -0.74
COPS3-201ENST00000268717 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
COPS3-201ENST00000268717 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.74
COPS3-201ENST00000268717 RYR2Q92736 4967 aa10.45□□□□□ -0.74
COPS3-201ENST00000268717 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
COPS3-201ENST00000268717 HERV-K104P63124 156 aa10.45□□□□□ -0.74
COPS3-201ENST00000268717 A0A1B0GWB2 263 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 IGHV3-30P01768 117 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 IGHV3-30-5P0DP03 117 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 ESRGQ1W209 222 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
COPS3-201ENST00000268717 COX11Q9Y6N1 276 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 LITAFQ99732 161 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
COPS3-201ENST00000268717 ALMS1Q8TCU4 4167 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 XCL1P47992 114 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 Q8N3U1 123 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
COPS3-201ENST00000268717 Q9H8V8 135 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 DNAH1Q9P2D7 4330 aa10.43□□□□□ -0.74
COPS3-201ENST00000268717 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
COPS3-201ENST00000268717 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
COPS3-201ENST00000268717 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
COPS3-201ENST00000268717 CIRBPQ14011 172 aaKnown RBP10.41□□□□□ -0.74
COPS3-201ENST00000268717 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
COPS3-201ENST00000268717 LCE6AA0A183 80 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 K7EP13 123 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 COX7A2LO14548 114 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 C5orf38Q86SI9 138 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 Q8IZM0 81 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 NHP2Q9NX24 153 aaKnown RBP10.4□□□□□ -0.74
COPS3-201ENST00000268717 KLK12Q9UKR0 248 aa10.4□□□□□ -0.74
COPS3-201ENST00000268717 NUPR2A6NF83 97 aa10.4□□□□□ -0.75
COPS3-201ENST00000268717 CRPP02741 224 aa10.4□□□□□ -0.75
COPS3-201ENST00000268717 IFITM1P13164 125 aa10.4□□□□□ -0.75
COPS3-201ENST00000268717 MIAQ16674 131 aa10.4□□□□□ -0.75
COPS3-201ENST00000268717 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.75
COPS3-201ENST00000268717 RPL24P83731 157 aaKnown RBP10.39□□□□□ -0.75
COPS3-201ENST00000268717 FOXI1Q12951 378 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms