RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DEFB130AP0DP74 79 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 DNAL4O96015 105 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 TRGV4A0A0C4DH28 118 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 IGKV3D-7A0A0C4DH55 119 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 SMIM1B2RUZ4 78 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
SGPP1-201ENST00000247225 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
SGPP1-201ENST00000247225 CRPP02741 224 aa12.07□□□□□ -0.48
SGPP1-201ENST00000247225 COX7A2LO14548 114 aa12.07□□□□□ -0.48
SGPP1-201ENST00000247225 Q96MF0 132 aa12.07□□□□□ -0.48
SGPP1-201ENST00000247225 APCP25054 2843 aa12.06□□□□□ -0.48
SGPP1-201ENST00000247225 ODF3L2Q3SX64 289 aa12.06□□□□□ -0.48
SGPP1-201ENST00000247225 C1orf158Q8N1D5 194 aa12.06□□□□□ -0.48
SGPP1-201ENST00000247225 C14orf132Q9NPU4 83 aa12.06□□□□□ -0.48
SGPP1-201ENST00000247225 SND1-IT1Q9HBX3 110 aa12.05□□□□□ -0.48
SGPP1-201ENST00000247225 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
SGPP1-201ENST00000247225 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
SGPP1-201ENST00000247225 ESM1Q9NQ30 184 aa12.05□□□□□ -0.48
SGPP1-201ENST00000247225 K7EQD1 137 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 EDA2RQ9HAV5 297 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 TIRAPP58753 221 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 C9orf153Q5TBE3 101 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 Q6YL49 198 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
SGPP1-201ENST00000247225 XCL1P47992 114 aa12.03□□□□□ -0.48
SGPP1-201ENST00000247225 PRORYQ9H606 182 aa12.03□□□□□ -0.48
SGPP1-201ENST00000247225 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.49
SGPP1-201ENST00000247225 AKAP9Q99996 3911 aa12.02□□□□□ -0.49
SGPP1-201ENST00000247225 PRR3P79522 188 aaKnown RBP12.01□□□□□ -0.49
SGPP1-201ENST00000247225 CDC42SE2Q9NRR3 84 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 LECT2O14960 151 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 HIST2H2BCQ6DN03 193 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 USP24Q9UPU5 2620 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 A0A087WYN8 130 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 C9orf129Q5T035 196 aaKnown RBP12.01□□□□□ -0.49
SGPP1-201ENST00000247225 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
SGPP1-201ENST00000247225 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
SGPP1-201ENST00000247225 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
SGPP1-201ENST00000247225 NCR3O14931 201 aa12□□□□□ -0.49
SGPP1-201ENST00000247225 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
SGPP1-201ENST00000247225 IGHV4-31P0DP07 118 aa11.99□□□□□ -0.49
SGPP1-201ENST00000247225 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
SGPP1-201ENST00000247225 IGLV10-54A0A075B6I4 117 aa11.98□□□□□ -0.49
SGPP1-201ENST00000247225 ZNF469Q96JG9 3925 aaPredicted RBP11.98□□□□□ -0.49
SGPP1-201ENST00000247225 CCL24O00175 119 aa11.98□□□□□ -0.49
SGPP1-201ENST00000247225 A0A087WVE0 104 aa11.98□□□□□ -0.49
SGPP1-201ENST00000247225 HIST1H4AP62805 103 aaKnown RBP11.98□□□□□ -0.49
SGPP1-201ENST00000247225 DEFB4AO15263 64 aa11.97□□□□□ -0.49
SGPP1-201ENST00000247225 SMIM11BQ8TCY0 68 aa11.97□□□□□ -0.49
SGPP1-201ENST00000247225 M0QXV9 152 aa11.97□□□□□ -0.49
SGPP1-201ENST00000247225 MALP21145 153 aa11.96□□□□□ -0.49
SGPP1-201ENST00000247225 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
SGPP1-201ENST00000247225 TIMM17BO60830 172 aa11.96□□□□□ -0.49
SGPP1-201ENST00000247225 DSCR9P59020 149 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 COPS9Q8WXC6 57 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 CCL18P55774 89 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 Q6Q795 121 aa11.94□□□□□ -0.5
SGPP1-201ENST00000247225 ITPR2Q14571 2701 aa11.93□□□□□ -0.5
SGPP1-201ENST00000247225 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
SGPP1-201ENST00000247225 TRAV13-2A0A0B4J235 113 aa11.93□□□□□ -0.5
SGPP1-201ENST00000247225 F5H768 121 aa11.93□□□□□ -0.5
SGPP1-201ENST00000247225 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
SGPP1-201ENST00000247225 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
SGPP1-201ENST00000247225 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
SGPP1-201ENST00000247225 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
SGPP1-201ENST00000247225 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
SGPP1-201ENST00000247225 IGKV2-28A0A075B6P5 120 aa11.91□□□□□ -0.5
SGPP1-201ENST00000247225 IGKV2D-28P01615 120 aa11.91□□□□□ -0.5
SGPP1-201ENST00000247225 J3QLI3 93 aa11.91□□□□□ -0.5
SGPP1-201ENST00000247225 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
SGPP1-201ENST00000247225 HECTD1Q9ULT8 2610 aa11.9□□□□□ -0.5
SGPP1-201ENST00000247225 NBPF19A0A087WUL8 3843 aa11.9□□□□□ -0.5
SGPP1-201ENST00000247225 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
SGPP1-201ENST00000247225 HTN3P15516 51 aa11.89□□□□□ -0.51
SGPP1-201ENST00000247225 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
SGPP1-201ENST00000247225 TRACP01848 142 aa11.88□□□□□ -0.51
SGPP1-201ENST00000247225 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
SGPP1-201ENST00000247225 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
SGPP1-201ENST00000247225 CR1P17927 2039 aa11.88□□□□□ -0.51
SGPP1-201ENST00000247225 A0A1B0GX51 115 aa11.88□□□□□ -0.51
SGPP1-201ENST00000247225 UBR5O95071 2799 aaPredicted RBP11.87□□□□□ -0.51
SGPP1-201ENST00000247225 GYPEP15421 78 aa11.87□□□□□ -0.51
SGPP1-201ENST00000247225 LINC00846Q9NV44 126 aa11.87□□□□□ -0.51
SGPP1-201ENST00000247225 ATRQ13535 2644 aa11.87□□□□□ -0.51
SGPP1-201ENST00000247225 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 A8MTW9 85 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 ACYP1P07311 99 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 Q8N3U1 123 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 SVIPQ8NHG7 77 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
SGPP1-201ENST00000247225 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
SGPP1-201ENST00000247225 A0A096LNT2 108 aa11.85□□□□□ -0.51
SGPP1-201ENST00000247225 CXCL5P42830 114 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms