RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
CDKN1B-201ENST00000228872 TRAV13-1A0A0B4J241 112 aa12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 IGHV4-59P01825 116 aa12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 PIK3CD-AS1Q5SR53 167 aa12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
CDKN1B-201ENST00000228872 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
CDKN1B-201ENST00000228872 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
CDKN1B-201ENST00000228872 ZNF415Q09FC8 603 aa12.67□□□□□ -0.38
CDKN1B-201ENST00000228872 TEX15Q9BXT5 2789 aa12.67□□□□□ -0.38
CDKN1B-201ENST00000228872 PDZD2O15018 2839 aa12.67□□□□□ -0.38
CDKN1B-201ENST00000228872 DNAL4O96015 105 aa12.66□□□□□ -0.38
CDKN1B-201ENST00000228872 PSMB8P28062 276 aa12.66□□□□□ -0.38
CDKN1B-201ENST00000228872 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
CDKN1B-201ENST00000228872 RS1O15537 224 aa12.65□□□□□ -0.38
CDKN1B-201ENST00000228872 OR13C6PQ8NH95 151 aa12.65□□□□□ -0.38
CDKN1B-201ENST00000228872 IGKV3D-7A0A0C4DH55 119 aa12.65□□□□□ -0.38
CDKN1B-201ENST00000228872 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
CDKN1B-201ENST00000228872 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.39
CDKN1B-201ENST00000228872 Q6YL49 198 aa12.65□□□□□ -0.39
CDKN1B-201ENST00000228872 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 SYNJ2BPP57105 145 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 Q6JHZ5 121 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 C10orf99Q6UWK7 81 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 PF4P02776 101 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 C14orf132Q9NPU4 83 aa12.64□□□□□ -0.39
CDKN1B-201ENST00000228872 KIR2DL5BQ8NHK3 375 aa12.63□□□□□ -0.39
CDKN1B-201ENST00000228872 UPK3BQ9BT76 320 aa12.63□□□□□ -0.39
CDKN1B-201ENST00000228872 CRPP02741 224 aa12.63□□□□□ -0.39
CDKN1B-201ENST00000228872 TMEM258P61165 79 aa12.63□□□□□ -0.39
CDKN1B-201ENST00000228872 SERP2Q8N6R1 65 aa12.63□□□□□ -0.39
CDKN1B-201ENST00000228872 ZNF469Q96JG9 3925 aaPredicted RBP12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 F5H768 121 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 RBMY1DP0C7P1 496 aaKnown RBP12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 A0A087WYN8 130 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 LINC00337Q8N6G1 96 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 OVOL2Q9BRP0 275 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 LINC00846Q9NV44 126 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 SORL1Q92673 2214 aa12.62□□□□□ -0.39
CDKN1B-201ENST00000228872 A0A087WVE0 104 aa12.6□□□□□ -0.39
CDKN1B-201ENST00000228872 DEFB131AP59861 70 aa12.6□□□□□ -0.39
CDKN1B-201ENST00000228872 OBSCN-AS1Q96MR7 158 aa12.6□□□□□ -0.39
CDKN1B-201ENST00000228872 ITPR3Q14573 2671 aa12.59□□□□□ -0.39
CDKN1B-201ENST00000228872 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
CDKN1B-201ENST00000228872 A8MTW9 85 aa12.59□□□□□ -0.39
CDKN1B-201ENST00000228872 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
CDKN1B-201ENST00000228872 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
CDKN1B-201ENST00000228872 AKAP9Q99996 3911 aa12.58□□□□□ -0.39
CDKN1B-201ENST00000228872 KRTAP1-1Q07627 177 aa12.58□□□□□ -0.4
CDKN1B-201ENST00000228872 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
CDKN1B-201ENST00000228872 SMIM11BQ8TCY0 68 aa12.58□□□□□ -0.4
CDKN1B-201ENST00000228872 TMEM89A2RUT3 159 aa12.57□□□□□ -0.4
CDKN1B-201ENST00000228872 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
CDKN1B-201ENST00000228872 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
CDKN1B-201ENST00000228872 OXTP01178 125 aa12.57□□□□□ -0.4
CDKN1B-201ENST00000228872 USP17L23D6RBM5 183 aa12.56□□□□□ -0.4
CDKN1B-201ENST00000228872 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
CDKN1B-201ENST00000228872 SND1-IT1Q9HBX3 110 aa12.56□□□□□ -0.4
CDKN1B-201ENST00000228872 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
CDKN1B-201ENST00000228872 WIPF1O43516 503 aa12.55□□□□□ -0.4
CDKN1B-201ENST00000228872 CDC42SE2Q9NRR3 84 aa12.55□□□□□ -0.4
CDKN1B-201ENST00000228872 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
CDKN1B-201ENST00000228872 ITPR2Q14571 2701 aa12.54□□□□□ -0.4
CDKN1B-201ENST00000228872 H0YGX0 51 aa12.54□□□□□ -0.4
CDKN1B-201ENST00000228872 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
CDKN1B-201ENST00000228872 NCR3O14931 201 aa12.53□□□□□ -0.4
CDKN1B-201ENST00000228872 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
CDKN1B-201ENST00000228872 LECT2O14960 151 aa12.52□□□□□ -0.41
CDKN1B-201ENST00000228872 ZNF702PQ9H963 129 aa12.52□□□□□ -0.41
CDKN1B-201ENST00000228872 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
CDKN1B-201ENST00000228872 FLNAP21333 2647 aaKnown RBP12.5□□□□□ -0.41
CDKN1B-201ENST00000228872 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
CDKN1B-201ENST00000228872 CCL18P55774 89 aa12.49□□□□□ -0.41
CDKN1B-201ENST00000228872 RPL36AP83881 106 aaKnown RBP12.49□□□□□ -0.41
CDKN1B-201ENST00000228872 RPL36ALQ969Q0 106 aaKnown RBP12.49□□□□□ -0.41
CDKN1B-201ENST00000228872 SLPIP03973 132 aa12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 LINC00158P58513 81 aa12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 ANK3Q12955 4377 aaKnown RBP12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 C4orf26Q17RF5 130 aa12.48□□□□□ -0.41
CDKN1B-201ENST00000228872 INSP01308 110 aa12.47□□□□□ -0.41
CDKN1B-201ENST00000228872 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
CDKN1B-201ENST00000228872 Q5XG85 94 aa12.47□□□□□ -0.41
CDKN1B-201ENST00000228872 K7EQD1 137 aa12.46□□□□□ -0.41
CDKN1B-201ENST00000228872 SS18Q15532 418 aa12.46□□□□□ -0.41
CDKN1B-201ENST00000228872 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 CCKP06307 115 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 HILS1P60008 231 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 FHL2Q14192 279 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 SLURP1P55000 103 aa12.45□□□□□ -0.42
CDKN1B-201ENST00000228872 UBE2E2Q96LR5 201 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms