RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 HERVK_113P63121 156 aa10.39□□□□□ -0.75
CNOT3-201ENST00000221232 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
CNOT3-201ENST00000221232 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
CNOT3-201ENST00000221232 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
CNOT3-201ENST00000221232 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
CNOT3-201ENST00000221232 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
CNOT3-201ENST00000221232 DAZ2Q13117 558 aaKnown RBP10.38□□□□□ -0.75
CNOT3-201ENST00000221232 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
CNOT3-201ENST00000221232 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
CNOT3-201ENST00000221232 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
CNOT3-201ENST00000221232 GCN1Q92616 2671 aaKnown RBP10.38□□□□□ -0.75
CNOT3-201ENST00000221232 NDUFA1O15239 70 aa10.37□□□□□ -0.75
CNOT3-201ENST00000221232 TRBV30A0A0K0K1B3 111 aa10.37□□□□□ -0.75
CNOT3-201ENST00000221232 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 C19orf73Q9NVV2 129 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
CNOT3-201ENST00000221232 HECTD1Q9ULT8 2610 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 A0A096LPF7 62 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 IGLV1-51P01701 117 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 COX6CP09669 75 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 ANK3Q12955 4377 aaKnown RBP10.35□□□□□ -0.75
CNOT3-201ENST00000221232 IGLV4-60A0A075B6I1 120 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 CRLF1O75462 422 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
CNOT3-201ENST00000221232 H7C423 109 aa10.34□□□□□ -0.75
CNOT3-201ENST00000221232 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
CNOT3-201ENST00000221232 C16orf74Q96GX8 76 aa10.34□□□□□ -0.75
CNOT3-201ENST00000221232 IGLV5-39A0A0G2JS06 123 aa10.33□□□□□ -0.76
CNOT3-201ENST00000221232 TEX29Q8N6K0 151 aa10.33□□□□□ -0.76
CNOT3-201ENST00000221232 C3orf56Q8N813 242 aa10.33□□□□□ -0.76
CNOT3-201ENST00000221232 UNC79Q9P2D8 2635 aa10.33□□□□□ -0.76
CNOT3-201ENST00000221232 VWFP04275 2813 aa10.33□□□□□ -0.76
CNOT3-201ENST00000221232 TRBV10-2A0A0K0K1G8 114 aa10.32□□□□□ -0.76
CNOT3-201ENST00000221232 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
CNOT3-201ENST00000221232 C11orf68Q9H3H3 251 aaKnown RBP10.32□□□□□ -0.76
CNOT3-201ENST00000221232 F5H768 121 aa10.32□□□□□ -0.76
CNOT3-201ENST00000221232 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
CNOT3-201ENST00000221232 DEFB4AO15263 64 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 KRTAP10-3P60369 221 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 SPATA3Q8NHX4 192 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 PF4P02776 101 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 IFITM1P13164 125 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 FHL2Q14192 279 aa10.31□□□□□ -0.76
CNOT3-201ENST00000221232 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
CNOT3-201ENST00000221232 CLPSL2Q6UWE3 100 aa10.3□□□□□ -0.76
CNOT3-201ENST00000221232 TIMM17BO60830 172 aa10.3□□□□□ -0.76
CNOT3-201ENST00000221232 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
CNOT3-201ENST00000221232 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
CNOT3-201ENST00000221232 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
CNOT3-201ENST00000221232 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
CNOT3-201ENST00000221232 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
CNOT3-201ENST00000221232 TRBV6-8A0A0A6YYG3 113 aa10.28□□□□□ -0.76
CNOT3-201ENST00000221232 PFN2P35080 140 aa10.28□□□□□ -0.76
CNOT3-201ENST00000221232 CMC4P56277 68 aaPredicted RBP10.28□□□□□ -0.76
CNOT3-201ENST00000221232 M0QXV9 152 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 LST1O00453 97 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 LINC00158P58513 81 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 HILS1P60008 231 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 MIR7-3HGQ8N6C7 128 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 OVOL2Q9BRP0 275 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
CNOT3-201ENST00000221232 GYPEP15421 78 aa10.26□□□□□ -0.77
CNOT3-201ENST00000221232 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
CNOT3-201ENST00000221232 CCDC179H3BU77 68 aa10.25□□□□□ -0.77
CNOT3-201ENST00000221232 J3QKU1 62 aa10.24□□□□□ -0.77
CNOT3-201ENST00000221232 XCL1P47992 114 aa10.24□□□□□ -0.77
CNOT3-201ENST00000221232 ANAPC13Q9BS18 74 aa10.24□□□□□ -0.77
CNOT3-201ENST00000221232 NHLRC4P0CG21 123 aaPredicted RBP10.23□□□□□ -0.77
CNOT3-201ENST00000221232 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
CNOT3-201ENST00000221232 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
CNOT3-201ENST00000221232 Q9HAA7 133 aa10.22□□□□□ -0.77
CNOT3-201ENST00000221232 OTOGQ6ZRI0 2925 aa10.22□□□□□ -0.77
CNOT3-201ENST00000221232 FAM218AQ96MZ4 157 aa10.22□□□□□ -0.77
CNOT3-201ENST00000221232 SNCGO76070 127 aa10.21□□□□□ -0.77
CNOT3-201ENST00000221232 Q8N3U1 123 aa10.21□□□□□ -0.78
CNOT3-201ENST00000221232 SND1-IT1Q9HBX3 110 aa10.21□□□□□ -0.78
CNOT3-201ENST00000221232 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 COX7A2LO14548 114 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 LY6G6DO95868 133 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 H3BT86 120 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 LINC00337Q8N6G1 96 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 LINC00959A0A1B0GUT2 108 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
CNOT3-201ENST00000221232 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
CNOT3-201ENST00000221232 TRRAPQ9Y4A5 3859 aa10.19□□□□□ -0.78
CNOT3-201ENST00000221232 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 ATRQ13535 2644 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 INAFM1C9JVW0 142 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms