RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TIMM17BO60830 172 aa9.9□□□□□ -0.82
RTFDC1-201ENST00000023939 RBX1P62877 108 aa9.9□□□□□ -0.82
RTFDC1-201ENST00000023939 LITAFQ99732 161 aa9.9□□□□□ -0.82
RTFDC1-201ENST00000023939 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
RTFDC1-201ENST00000023939 K7ERJ3 54 aa9.9□□□□□ -0.83
RTFDC1-201ENST00000023939 RAB37Q96AX2 223 aa9.9□□□□□ -0.83
RTFDC1-201ENST00000023939 STAB1Q9NY15 2570 aa9.9□□□□□ -0.83
RTFDC1-201ENST00000023939 H3BUT2 72 aa9.89□□□□□ -0.83
RTFDC1-201ENST00000023939 CCL25O15444 150 aa9.89□□□□□ -0.83
RTFDC1-201ENST00000023939 IGHV3OR16-9A0A0B4J2B5 98 aa9.88□□□□□ -0.83
RTFDC1-201ENST00000023939 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
RTFDC1-201ENST00000023939 SPANXCQ9NY87 97 aa9.88□□□□□ -0.83
RTFDC1-201ENST00000023939 A0A096LPF7 62 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 A0A1W2PPM0 123 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 HTN3P15516 51 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 KPRPQ5T749 579 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 LELP1Q5T871 98 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 IGLL5B9A064 214 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
RTFDC1-201ENST00000023939 A0A087WZ39 114 aa9.86□□□□□ -0.83
RTFDC1-201ENST00000023939 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
RTFDC1-201ENST00000023939 FABP2P12104 132 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 HERV-K104P63124 156 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 SS18Q15532 418 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 MIAQ16674 131 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 MUSTN1Q8IVN3 82 aa9.85□□□□□ -0.83
RTFDC1-201ENST00000023939 K7EP34 96 aa9.84□□□□□ -0.83
RTFDC1-201ENST00000023939 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
RTFDC1-201ENST00000023939 Q9H8V8 135 aa9.84□□□□□ -0.83
RTFDC1-201ENST00000023939 IGKV3OR2-268A0A0C4DH90 116 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 CFC1BP0CG36 223 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 CFC1P0CG37 223 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 IFITM1P13164 125 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 SPATA25Q9BR10 227 aa9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 NAA38Q9BRA0 125 aaKnown RBP9.83□□□□□ -0.84
RTFDC1-201ENST00000023939 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 A4D1N5 150 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 Q6ZTC4 211 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 MDFIQ99750 246 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 A0A0B4J2C4 111 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 K7EIL1 84 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
RTFDC1-201ENST00000023939 SPCS1Q9Y6A9 102 aa9.81□□□□□ -0.84
RTFDC1-201ENST00000023939 COL6A5A8TX70 2615 aa9.81□□□□□ -0.84
RTFDC1-201ENST00000023939 CMYA5Q8N3K9 4069 aa9.81□□□□□ -0.84
RTFDC1-201ENST00000023939 APOMO95445 188 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 LINC00269Q8N2A0 174 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 PGPEP1Q9NXJ5 209 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 DNAH3Q8TD57 4116 aa9.8□□□□□ -0.84
RTFDC1-201ENST00000023939 REG3AQ06141 175 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 CD164L2Q6UWJ8 174 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 PRO1854Q9UHT4 67 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 TSPAN13O95857 204 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 PRSS2P07478 247 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 C5orf38Q86SI9 138 aa9.79□□□□□ -0.84
RTFDC1-201ENST00000023939 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
RTFDC1-201ENST00000023939 XCL1P47992 114 aa9.78□□□□□ -0.84
RTFDC1-201ENST00000023939 COPS9Q8WXC6 57 aa9.78□□□□□ -0.84
RTFDC1-201ENST00000023939 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
RTFDC1-201ENST00000023939 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-201ENST00000023939 DNHD1Q96M86 4753 aa9.77□□□□□ -0.85
RTFDC1-201ENST00000023939 DEFB131BA0A096LNP1 70 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 PRB2P02812 416 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 Q8N3U1 123 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 Q8IZM0 81 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
RTFDC1-201ENST00000023939 MEIG1Q5JSS6 88 aa9.75□□□□□ -0.85
RTFDC1-201ENST00000023939 PKD1L1Q8TDX9 2849 aa9.75□□□□□ -0.85
RTFDC1-201ENST00000023939 COX7A2LO14548 114 aa9.74□□□□□ -0.85
RTFDC1-201ENST00000023939 LYRM7Q5U5X0 104 aa9.74□□□□□ -0.85
RTFDC1-201ENST00000023939 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
RTFDC1-201ENST00000023939 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 FOXI1Q12951 378 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 DEFB121Q5J5C9 76 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 DAND5Q8N907 189 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
RTFDC1-201ENST00000023939 TRAV8-4A0A0B4J246 113 aa9.71□□□□□ -0.85
RTFDC1-201ENST00000023939 ESRGQ1W209 222 aa9.71□□□□□ -0.85
RTFDC1-201ENST00000023939 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.85
RTFDC1-201ENST00000023939 ENHOQ6UWT2 76 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms