RNA–Protein interactions for RNA: ENST00000640583.1

MED17-228, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,835 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-228ENST00000640583 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
MED17-228ENST00000640583 DOPEY2Q9Y3R5 2298 aa13.24□□□□□ -0.29
MED17-228ENST00000640583 SYNJ2BPP57105 145 aa13.24□□□□□ -0.29
MED17-228ENST00000640583 SPTAN1Q13813 2472 aaKnown RBP13.24□□□□□ -0.29
MED17-228ENST00000640583 IGHV3OR16-12A0A075B7B8 117 aa13.24□□□□□ -0.29
MED17-228ENST00000640583 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
MED17-228ENST00000640583 FAM218AQ96MZ4 157 aa13.24□□□□□ -0.29
MED17-228ENST00000640583 KLK5Q9Y337 293 aaPredicted RBP13.24□□□□□ -0.29
MED17-228ENST00000640583 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
MED17-228ENST00000640583 ZNF415Q09FC8 603 aa13.23□□□□□ -0.29
MED17-228ENST00000640583 PIK3CD-AS1Q5SR53 167 aa13.23□□□□□ -0.29
MED17-228ENST00000640583 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
MED17-228ENST00000640583 CSDC2Q9Y534 153 aaKnown RBP13.23□□□□□ -0.29
MED17-228ENST00000640583 LRRC75A-AS1Q8N1F1 130 aa13.22□□□□□ -0.29
MED17-228ENST00000640583 J3KT08 172 aa13.22□□□□□ -0.29
MED17-228ENST00000640583 IGHV3-53P01767 116 aa13.22□□□□□ -0.29
MED17-228ENST00000640583 AKAP6Q13023 2319 aa13.22□□□□□ -0.29
MED17-228ENST00000640583 PKD1L2Q7Z442 2459 aa13.22□□□□□ -0.29
MED17-228ENST00000640583 MALP21145 153 aa13.21□□□□□ -0.29
MED17-228ENST00000640583 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
MED17-228ENST00000640583 ATOX1O00244 68 aa13.21□□□□□ -0.29
MED17-228ENST00000640583 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.3
MED17-228ENST00000640583 HIST2H2BDQ6DRA6 164 aa13.21□□□□□ -0.3
MED17-228ENST00000640583 C10orf99Q6UWK7 81 aa13.21□□□□□ -0.3
MED17-228ENST00000640583 C2orf48Q96LS8 159 aa13.21□□□□□ -0.3
MED17-228ENST00000640583 Q9HAA7 133 aa13.21□□□□□ -0.3
MED17-228ENST00000640583 SORL1Q92673 2214 aa13.2□□□□□ -0.3
MED17-228ENST00000640583 IGHV4-61A0A0C4DH41 118 aa13.2□□□□□ -0.3
MED17-228ENST00000640583 A0A1B0GX51 115 aa13.2□□□□□ -0.3
MED17-228ENST00000640583 CRYGAP11844 174 aa13.2□□□□□ -0.3
MED17-228ENST00000640583 TRAV13-1A0A0B4J241 112 aa13.18□□□□□ -0.3
MED17-228ENST00000640583 HIST1H4AP62805 103 aaKnown RBP13.18□□□□□ -0.3
MED17-228ENST00000640583 DEFB131AP59861 70 aa13.18□□□□□ -0.3
MED17-228ENST00000640583 TRAV13-2A0A0B4J235 113 aa13.17□□□□□ -0.3
MED17-228ENST00000640583 PIMREGQ9BSJ6 248 aa13.17□□□□□ -0.3
MED17-228ENST00000640583 DNAL4O96015 105 aa13.17□□□□□ -0.3
MED17-228ENST00000640583 PF4P02776 101 aa13.17□□□□□ -0.3
MED17-228ENST00000640583 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
MED17-228ENST00000640583 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
MED17-228ENST00000640583 ABCA2Q9BZC7 2435 aa13.16□□□□□ -0.3
MED17-228ENST00000640583 FAM19A3Q7Z5A8 133 aa13.16□□□□□ -0.3
MED17-228ENST00000640583 hADV29S1A0JD25 119 aa13.15□□□□□ -0.3
MED17-228ENST00000640583 CRPP02741 224 aa13.15□□□□□ -0.3
MED17-228ENST00000640583 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
MED17-228ENST00000640583 OVOL2Q9BRP0 275 aa13.15□□□□□ -0.3
MED17-228ENST00000640583 NACAE9PAV3 2078 aa13.15□□□□□ -0.31
MED17-228ENST00000640583 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
MED17-228ENST00000640583 RBMY1BA6NDE4 496 aaKnown RBP13.14□□□□□ -0.31
MED17-228ENST00000640583 RBMY1EA6NEQ0 496 aaKnown RBP13.14□□□□□ -0.31
MED17-228ENST00000640583 RBMY1DP0C7P1 496 aaKnown RBP13.14□□□□□ -0.31
MED17-228ENST00000640583 RS1O15537 224 aa13.14□□□□□ -0.31
MED17-228ENST00000640583 RPS28P62857 69 aaKnown RBP13.14□□□□□ -0.31
MED17-228ENST00000640583 C5orf47Q569G3 176 aa13.14□□□□□ -0.31
MED17-228ENST00000640583 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
MED17-228ENST00000640583 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
MED17-228ENST00000640583 CELSR1Q9NYQ6 3014 aa13.13□□□□□ -0.31
MED17-228ENST00000640583 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
MED17-228ENST00000640583 A8MTW9 85 aa13.12□□□□□ -0.31
MED17-228ENST00000640583 F5H768 121 aa13.12□□□□□ -0.31
MED17-228ENST00000640583 C14orf132Q9NPU4 83 aa13.11□□□□□ -0.31
MED17-228ENST00000640583 SMIM9A6NGZ8 99 aa13.11□□□□□ -0.31
MED17-228ENST00000640583 IGKV3D-7A0A0C4DH55 119 aa13.1□□□□□ -0.31
MED17-228ENST00000640583 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
MED17-228ENST00000640583 ACACBO00763 2458 aa13.1□□□□□ -0.31
MED17-228ENST00000640583 IGHV4-59P01825 116 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 MSMBP08118 114 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 A0A087WYN8 130 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 Q6JHZ5 121 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 SND1-IT1Q9HBX3 110 aa13.09□□□□□ -0.31
MED17-228ENST00000640583 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
MED17-228ENST00000640583 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
MED17-228ENST00000640583 CDC42SE2Q9NRR3 84 aa13.08□□□□□ -0.32
MED17-228ENST00000640583 C9orf129Q5T035 196 aaKnown RBP13.08□□□□□ -0.32
MED17-228ENST00000640583 AVPP01185 164 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 SERP2Q8N6R1 65 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 LINC00846Q9NV44 126 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 IGKV2-28A0A075B6P5 120 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 H0YGX0 51 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 IGKV2D-28P01615 120 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 RPL36AP83881 106 aaKnown RBP13.07□□□□□ -0.32
MED17-228ENST00000640583 RPL36ALQ969Q0 106 aaKnown RBP13.07□□□□□ -0.32
MED17-228ENST00000640583 CYSTM1Q9H1C7 97 aa13.07□□□□□ -0.32
MED17-228ENST00000640583 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.07□□□□□ -0.326e-7■■■■□ 25.2
MED17-228ENST00000640583 Q96MF0 132 aa13.06□□□□□ -0.32
MED17-228ENST00000640583 IGSF10Q6WRI0 2623 aa13.06□□□□□ -0.32
MED17-228ENST00000640583 CREBBPQ92793 2442 aa13.06□□□□□ -0.32
MED17-228ENST00000640583 INSP01308 110 aa13.06□□□□□ -0.32
MED17-228ENST00000640583 CFAP46Q8IYW2 2715 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 ATP5J2P56134 94 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 NTM-AS1Q6ZSK4 140 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 C19orf84I3L1E1 186 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 TMEM258P61165 79 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 OBSCN-AS1Q96MR7 158 aa13.05□□□□□ -0.32
MED17-228ENST00000640583 DEFB112Q30KQ8 113 aa13.04□□□□□ -0.32
MED17-228ENST00000640583 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
MED17-228ENST00000640583 IGHV4-30-2A0A087WSY4 118 aa13.03□□□□□ -0.32
MED17-228ENST00000640583 GNLYP22749 145 aa13.03□□□□□ -0.32
MED17-228ENST00000640583 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms