RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 TMEM170BQ5T4T1 132 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 BAGE2Q86Y30 109 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 FAM213BQ8TBF2 198 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 DPH3P1Q9H4G8 78 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 A2ML1A8K2U0 1454 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 URB1O60287 2271 aaKnown RBP0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 PLXNB2O15031 1838 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 ANKRD17O75179 2603 aaKnown RBP0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 ABCA2Q9BZC7 2435 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 A0A0D9SFI3 127 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 IGLC7A0M8Q6 106 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 CHKB-CPT1BH3BT56 60 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 SPINK8P0C7L1 97 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 IFITM1P13164 125 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 GNG11P61952 73 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 Q5BKY6 102 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 WNK3Q9BYP7 1800 aa0.31□□□□□ -2.36
GPCPD1-207ENST00000633552 MYOM2P54296 1465 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 PXDNQ92626 1479 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 HMGN4O00479 90 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 SPINK1P00995 79 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 APOC3P02656 99 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 DCDP81605 110 aaKnown RBP0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 GTF2H5Q6ZYL4 71 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 ROBO1Q9Y6N7 1651 aa0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
GPCPD1-207ENST00000633552 CHD6Q8TD26 2715 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 CSMD3Q7Z407 3707 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 BCL9LQ86UU0 1499 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 UNC13BO14795 1591 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 WNK2Q9Y3S1 2297 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 LOC285095A0A1B0GVY8 99 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 C20orf202A1L168 122 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 UQCR11O14957 56 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 WHAMMP3Q1A5X7 153 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 AMELXQ99217 191 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 UQCR10Q9UDW1 63 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 PRO0255Q9UI72 69 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 LINC01558Q9Y6Z2 57 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 ZFHX3Q15911 3703 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 ZNF609O15014 1411 aa0.29□□□□□ -2.36
GPCPD1-207ENST00000633552 SPTA1P02549 2419 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 PTPN13Q12923 2485 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 QRICH2Q9H0J4 1663 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 BCE1O60756 84 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 S100A3P33764 101 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 SNCAP37840 140 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 ATP5EP56381 51 aaPredicted RBP0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 COX17Q14061 63 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 MANBALQ9NQG1 85 aa0.28□□□□□ -2.36
GPCPD1-207ENST00000633552 CUL7Q14999 1698 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 HIVEP3Q5T1R4 2406 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 SFT2D2O95562 160 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 S100PP25815 95 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 Q6JHZ5 121 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 SFTA2Q6UW10 78 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 CNFNQ9BYD5 112 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 C10orf71Q711Q0 1435 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 WDR7Q9Y4E6 1490 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 FSIP2Q5CZC0 6907 aa0.27□□□□□ -2.37
GPCPD1-207ENST00000633552 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 HSD52Q0P140 79 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 LINC00472Q9H8W2 130 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 NXT2Q9NPJ8 142 aaKnown RBP0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 FAIMQ9NVQ4 179 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 SPCS1Q9Y6A9 102 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 ARL2-SNX15V9GYD0 113 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 EIF4G3O43432 1585 aaKnown RBP0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 KDM3BQ7LBC6 1761 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 SBF2Q86WG5 1849 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 DNAJC13O75165 2243 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 ATRQ13535 2644 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
GPCPD1-207ENST00000633552 PKD1L1Q8TDX9 2849 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 ERCC6L2Q5T890 1561 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 PZPP20742 1482 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 SCAPERQ9BY12 1400 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 NCOA3Q9Y6Q9 1424 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 TRAV22A0A0B4J277 110 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 NAP1L6A6NFF2 107 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 M0R3E3 92 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 CFDP00746 253 aaPredicted RBP0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 IGLC1P0CG04 106 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 TRAPPC2P0DI81 140 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 TRAPPC2BP0DI82 140 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 Q0VG73 95 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 CDC42SE2Q9NRR3 84 aa0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
GPCPD1-207ENST00000633552 BTAF1O14981 1849 aa0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 KIF21AQ7Z4S6 1674 aa0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 MGPP08493 103 aa0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 UBA52P62987 128 aaKnown RBP0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 FAM167A-AS1Q96KT0 104 aa0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 C12orf57Q99622 126 aa0.24□□□□□ -2.37
GPCPD1-207ENST00000633552 CRYM-AS1A6NIL9 109 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms