RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 GAGE13Q4V321 117 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 DGAT2L7PQ6IED9 249 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 CEMP1Q6PRD7 247 aaPredicted RBP3.93□□□□□ -1.78
NEK3-211ENST00000629912 Q6ZVH6 145 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 CDC42SE2Q9NRR3 84 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 SPANXB1Q9NS25 103 aaPredicted RBP3.93□□□□□ -1.78
NEK3-211ENST00000629912 IGHV1-58A0A0C4DH39 117 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 A0A0J9YY99 117 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 A8MZ25 164 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 MIFP14174 115 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
NEK3-211ENST00000629912 PTTG1IPP53801 180 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 FXYD2P54710 66 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 C12orf74Q32Q52 190 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 SHISA2Q6UWI4 295 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 RNF183Q96D59 192 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 F8P00451 2351 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 VWFP04275 2813 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
NEK3-211ENST00000629912 ATRQ13535 2644 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 CCL25O15444 150 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 IGHV3-30-3P0DP02 117 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 HERVK_113P63121 156 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 VAMP3Q15836 100 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 KRTAP24-1Q3LI83 254 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 SCGB1D4Q6XE38 83 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 Q6ZUT4 128 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 TMEM101Q96IK0 257 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 VSIG2Q96IQ7 327 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 GEMIN7Q9H840 131 aaKnown RBP3.91□□□□□ -1.78
NEK3-211ENST00000629912 PRO0255Q9UI72 69 aa3.91□□□□□ -1.78
NEK3-211ENST00000629912 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.78
NEK3-211ENST00000629912 LOC100131303A0A0U1RQF7 123 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 TMEM238LA0A1B0GVL6 79 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 A6NJY4 79 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 K7EP13 123 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 UBE2L6O14933 153 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 IGHV3-30P01768 117 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 IGHV3-30-5P0DP03 117 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 IGHV4-30-4P0DP06 118 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 DEFB130BP0DP73 79 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 DEFB130AP0DP74 79 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 COX6A2Q02221 97 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 SRSF9Q13242 221 aaKnown RBP eCLIP3.9□□□□□ -1.79
NEK3-211ENST00000629912 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
NEK3-211ENST00000629912 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 FAM222AQ5U5X8 452 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 C3orf56Q8N813 242 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 Q8NAQ8 132 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 ATP6V0E2Q8NHE4 81 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
NEK3-211ENST00000629912 IGHV4-28A0A0C4DH34 117 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 IGLV5-39A0A0G2JS06 123 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 A0A0J9YXY3 114 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 GAGE10A6NGK3 116 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 IGLL5B9A064 214 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 H3BUT2 72 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 TIMM17BO60830 172 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 SPART-AS1P0CW21 52 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 GYPEP15421 78 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 DEFB135Q30KP9 77 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 SAMD5Q5TGI4 173 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 ZFAND6Q6FIF0 208 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 GTF2H5Q6ZYL4 71 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
NEK3-211ENST00000629912 NHP2Q9NX24 153 aaKnown RBP3.89□□□□□ -1.79
NEK3-211ENST00000629912 FLNBO75369 2602 aaKnown RBP3.88□□□□□ -1.79
NEK3-211ENST00000629912 TRAV26-1A0A087WT03 109 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 TRAV8-3A0A0A6YYJ7 113 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 TMEM238C9JI98 176 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 K7EP34 96 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 NDUFA1O15239 70 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 PAX4O43316 350 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 ATP5G1P05496 136 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 FABP2P12104 132 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 DAD1P61803 113 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 GAGE6Q13070 117 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 SPANXDQ9BXN6 97 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
NEK3-211ENST00000629912 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 F5H768 121 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 K7ERJ3 54 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 CFC1BP0CG36 223 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 CFC1P0CG37 223 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms