RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 A0A087WTM6 91 aa12.36□□□□□ -0.43
CIRBP-245ENST00000621399 IFI27P40305 119 aaPredicted RBP12.36□□□□□ -0.43
CIRBP-245ENST00000621399 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
CIRBP-245ENST00000621399 IGKV3OR2-268A0A0C4DH90 116 aa12.35□□□□□ -0.43
CIRBP-245ENST00000621399 PRSS3P2Q8NHM4 247 aa12.35□□□□□ -0.43
CIRBP-245ENST00000621399 UBE2D4Q9Y2X8 147 aa12.35□□□□□ -0.43
CIRBP-245ENST00000621399 IGLV10-54A0A075B6I4 117 aa12.34□□□□□ -0.43
CIRBP-245ENST00000621399 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
CIRBP-245ENST00000621399 RPL39P62891 51 aaKnown RBP12.34□□□□□ -0.43
CIRBP-245ENST00000621399 ZNF664Q8N3J9 261 aa12.34□□□□□ -0.43
CIRBP-245ENST00000621399 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
CIRBP-245ENST00000621399 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
CIRBP-245ENST00000621399 LRCOL1A6NCL2 159 aa12.33□□□□□ -0.44
CIRBP-245ENST00000621399 K7EMI3 77 aa12.33□□□□□ -0.44
CIRBP-245ENST00000621399 ORMDL2Q53FV1 153 aa12.33□□□□□ -0.44
CIRBP-245ENST00000621399 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
CIRBP-245ENST00000621399 TIMM21Q9BVV7 248 aa12.33□□□□□ -0.44
CIRBP-245ENST00000621399 CSDC2Q9Y534 153 aaKnown RBP12.33□□□□□ -0.44
CIRBP-245ENST00000621399 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
CIRBP-245ENST00000621399 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
CIRBP-245ENST00000621399 LECT2O14960 151 aa12.3□□□□□ -0.44
CIRBP-245ENST00000621399 KRTAP26-1Q6PEX3 210 aa12.29□□□□□ -0.44
CIRBP-245ENST00000621399 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
CIRBP-245ENST00000621399 G0S2P27469 103 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 KRTAP10-2P60368 255 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 WFDC2Q14508 124 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 RNASE13Q5GAN3 156 aaKnown RBP12.28□□□□□ -0.44
CIRBP-245ENST00000621399 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 Q6ZUT4 128 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 Q8N814 137 aa12.28□□□□□ -0.44
CIRBP-245ENST00000621399 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 SCO1O75880 301 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 CHCHD10Q8WYQ3 142 aaPredicted RBP12.27□□□□□ -0.45
CIRBP-245ENST00000621399 OPRPNQ99935 248 aaPredicted RBP12.27□□□□□ -0.45
CIRBP-245ENST00000621399 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 HERC2O95714 4834 aa12.27□□□□□ -0.45
CIRBP-245ENST00000621399 COLCA2A8K830 154 aa12.26□□□□□ -0.45
CIRBP-245ENST00000621399 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
CIRBP-245ENST00000621399 SS18Q15532 418 aa12.26□□□□□ -0.45
CIRBP-245ENST00000621399 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
CIRBP-245ENST00000621399 PKHD1P08F94 4074 aa12.26□□□□□ -0.45
CIRBP-245ENST00000621399 DYNC1H1Q14204 4646 aaKnown RBP12.25□□□□□ -0.45
CIRBP-245ENST00000621399 LINC01546A6NGU7 62 aa12.25□□□□□ -0.45
CIRBP-245ENST00000621399 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
CIRBP-245ENST00000621399 C16orf90A8MZG2 172 aa12.24□□□□□ -0.45
CIRBP-245ENST00000621399 CCL25O15444 150 aa12.24□□□□□ -0.45
CIRBP-245ENST00000621399 XCL1P47992 114 aa12.24□□□□□ -0.45
CIRBP-245ENST00000621399 FAM104AQ969W3 186 aa12.24□□□□□ -0.45
CIRBP-245ENST00000621399 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
CIRBP-245ENST00000621399 C1orf196B1AJZ1 125 aa12.23□□□□□ -0.45
CIRBP-245ENST00000621399 USP17L23D6RBM5 183 aa12.23□□□□□ -0.45
CIRBP-245ENST00000621399 TRGC2P03986 189 aa12.23□□□□□ -0.45
CIRBP-245ENST00000621399 IGLV4-3A0A075B6K6 122 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 LINC00614P0C842 121 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 C14orf177Q52M58 125 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 CDPF1Q6NVV7 123 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-245ENST00000621399 TOMM6Q96B49 74 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 AP5S1Q9NUS5 200 aa12.22□□□□□ -0.45
CIRBP-245ENST00000621399 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.45
CIRBP-245ENST00000621399 IGLV5-52A0A0A0MRZ9 124 aa12.21□□□□□ -0.45
CIRBP-245ENST00000621399 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
CIRBP-245ENST00000621399 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
CIRBP-245ENST00000621399 RAB5BP61020 215 aa12.21□□□□□ -0.45
CIRBP-245ENST00000621399 S100A1P23297 94 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 FOXI1Q12951 378 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 Q6ZN92 141 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 URB1-AS1Q96HZ7 61 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 SCGB3A1Q96QR1 104 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 DNAH5Q8TE73 4624 aa12.2□□□□□ -0.46
CIRBP-245ENST00000621399 LINC01549A6NIU2 74 aa12.19□□□□□ -0.46
CIRBP-245ENST00000621399 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
CIRBP-245ENST00000621399 NPSP0C0P6 89 aa12.19□□□□□ -0.46
CIRBP-245ENST00000621399 TEX43Q6ZNM6 134 aa12.19□□□□□ -0.46
CIRBP-245ENST00000621399 VCX2Q9H322 139 aa12.19□□□□□ -0.46
CIRBP-245ENST00000621399 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
CIRBP-245ENST00000621399 ERASQ7Z444 233 aa12.18□□□□□ -0.46
CIRBP-245ENST00000621399 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
CIRBP-245ENST00000621399 PAPPA-AS1Q5QFB9 102 aa12.17□□□□□ -0.46
CIRBP-245ENST00000621399 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
CIRBP-245ENST00000621399 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
CIRBP-245ENST00000621399 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
CIRBP-245ENST00000621399 PRSS1P07477 247 aa12.16□□□□□ -0.46
CIRBP-245ENST00000621399 ZC2HC1BQ5TFG8 222 aa12.16□□□□□ -0.46
CIRBP-245ENST00000621399 BAGE3Q86Y29 109 aa12.16□□□□□ -0.46
CIRBP-245ENST00000621399 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
CIRBP-245ENST00000621399 GCSHP23434 173 aa12.15□□□□□ -0.46
CIRBP-245ENST00000621399 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
CIRBP-245ENST00000621399 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.46
CIRBP-245ENST00000621399 AMELXQ99217 191 aa12.15□□□□□ -0.46
CIRBP-245ENST00000621399 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 COX7A2LO14548 114 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 HBDP02042 147 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 MALP21145 153 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms