RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 NXPH4O95158 308 aa11.29□□□□□ -0.6
NOP56-220ENST00000616692 MSMBP08118 114 aa11.29□□□□□ -0.6
NOP56-220ENST00000616692 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
NOP56-220ENST00000616692 DNAL4O96015 105 aa11.28□□□□□ -0.6
NOP56-220ENST00000616692 FAM222AQ5U5X8 452 aa11.28□□□□□ -0.6
NOP56-220ENST00000616692 TRAV13-2A0A0B4J235 113 aa11.28□□□□□ -0.6
NOP56-220ENST00000616692 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
NOP56-220ENST00000616692 CD164L2Q6UWJ8 174 aa11.28□□□□□ -0.6
NOP56-220ENST00000616692 IGLV4-69A0A075B6H9 119 aa11.27□□□□□ -0.6
NOP56-220ENST00000616692 PRCDQ00LT1 54 aa11.27□□□□□ -0.6
NOP56-220ENST00000616692 CNFNQ9BYD5 112 aa11.27□□□□□ -0.6
NOP56-220ENST00000616692 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
NOP56-220ENST00000616692 RPL28P46779 137 aaKnown RBP11.27□□□□□ -0.61
NOP56-220ENST00000616692 M0R1W7 72 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 Q8IYB0 196 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 TRAV7A0A075B6U4 112 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 C8orf87E5RJ46 101 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 NDUFC1O43677 76 aa11.26□□□□□ -0.61
NOP56-220ENST00000616692 TRAV12-3A0A0B4J271 114 aa11.25□□□□□ -0.61
NOP56-220ENST00000616692 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
NOP56-220ENST00000616692 NDUFB3O43676 98 aa11.25□□□□□ -0.61
NOP56-220ENST00000616692 LMO4P61968 165 aa11.25□□□□□ -0.61
NOP56-220ENST00000616692 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 A0A096LPE4 126 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 A0A1W2PPZ6 126 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 PROP1O75360 226 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 BAALC-AS2P0C853 105 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 ZNF32P17041 273 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 LINC00846Q9NV44 126 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
NOP56-220ENST00000616692 BCE1O60756 84 aa11.23□□□□□ -0.61
NOP56-220ENST00000616692 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
NOP56-220ENST00000616692 RMI2Q96E14 147 aa11.23□□□□□ -0.61
NOP56-220ENST00000616692 NBEAL1Q6ZS30 2694 aa11.23□□□□□ -0.61
NOP56-220ENST00000616692 SDHAF1A6NFY7 115 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
NOP56-220ENST00000616692 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 FSHBP01225 129 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 IGLV3-9A0A075B6K5 115 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 A0A0J9YX75 114 aa11.22□□□□□ -0.61
NOP56-220ENST00000616692 PATE4P0C8F1 98 aa11.21□□□□□ -0.61
NOP56-220ENST00000616692 C2orf66Q6UXQ4 117 aa11.21□□□□□ -0.61
NOP56-220ENST00000616692 SNURFQ9Y675 71 aa11.21□□□□□ -0.61
NOP56-220ENST00000616692 ZNF503-AS2A6NEH8 195 aa11.21□□□□□ -0.62
NOP56-220ENST00000616692 IGIPA6NJ69 53 aa11.21□□□□□ -0.62
NOP56-220ENST00000616692 LEPROTO15243 131 aa11.21□□□□□ -0.62
NOP56-220ENST00000616692 TRBV12-3P01733 135 aa11.21□□□□□ -0.62
NOP56-220ENST00000616692 EGR2P11161 476 aaPredicted RBP11.21□□□□□ -0.62
NOP56-220ENST00000616692 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 M0R378 163 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 ESRGQ1W209 222 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 Q6ZSV7 163 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 COX7A2LO14548 114 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 GRPP07492 148 aa11.2□□□□□ -0.62
NOP56-220ENST00000616692 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
NOP56-220ENST00000616692 SUB1P53999 127 aaKnown RBP eCLIP11.19□□□□□ -0.62
NOP56-220ENST00000616692 BLCAPP62952 87 aa11.19□□□□□ -0.62
NOP56-220ENST00000616692 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
NOP56-220ENST00000616692 TMEM14CQ9P0S9 112 aa11.19□□□□□ -0.62
NOP56-220ENST00000616692 CUBNO60494 3623 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 LYNX1G3V0Z9 82 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 J3QT63 122 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 LHBP01229 141 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 VPREB1P12018 145 aa11.18□□□□□ -0.62
NOP56-220ENST00000616692 IGKV1D-17A0A075B6S4 117 aa11.17□□□□□ -0.62
NOP56-220ENST00000616692 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
NOP56-220ENST00000616692 A0A087WZ39 114 aa11.17□□□□□ -0.62
NOP56-220ENST00000616692 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
NOP56-220ENST00000616692 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
NOP56-220ENST00000616692 LINC00588Q9Y4M8 146 aa11.16□□□□□ -0.62
NOP56-220ENST00000616692 ZNF826PQ6ZT77 177 aa11.16□□□□□ -0.62
NOP56-220ENST00000616692 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
NOP56-220ENST00000616692 LITAFQ99732 161 aa11.15□□□□□ -0.62
NOP56-220ENST00000616692 TRGV3P03979 118 aa11.14□□□□□ -0.63
NOP56-220ENST00000616692 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
NOP56-220ENST00000616692 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
NOP56-220ENST00000616692 PSPNO60542 156 aa11.13□□□□□ -0.63
NOP56-220ENST00000616692 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
NOP56-220ENST00000616692 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
NOP56-220ENST00000616692 RNASE1P07998 156 aaKnown RBP11.13□□□□□ -0.63
NOP56-220ENST00000616692 ERHP84090 104 aaKnown RBP11.12□□□□□ -0.63
NOP56-220ENST00000616692 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 MRPL36Q9P0J6 103 aaKnown RBP11.12□□□□□ -0.63
NOP56-220ENST00000616692 NDUFS5O43920 106 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
NOP56-220ENST00000616692 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
NOP56-220ENST00000616692 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 ZNF73O43830 326 aaPredicted RBP11.12□□□□□ -0.63
NOP56-220ENST00000616692 TSHBP01222 138 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 VMO1Q7Z5L0 202 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
NOP56-220ENST00000616692 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 MIAQ16674 131 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 Q6ZVQ6 151 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms