RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	FAM208B	Q5VWN6	2430 aa		11.52	□□□□□ -0.57
SYNRG-223	ENST00000616179	CFHR3	Q02985	330 aa		11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179		Q8N2B8	174 aa		11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179	ZNF415	Q09FC8	603 aa		11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179	USP9X	Q93008	2570 aa	Predicted RBP	11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179	TRAV13-2	A0A0B4J235	113 aa		11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179	MIR7-3HG	Q8N6C7	128 aa		11.51	□□□□□ -0.57
SYNRG-223	ENST00000616179	GHRH	P01286	108 aa		11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	PIP4P1	Q86T03	277 aa		11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	USP17L23	D6RBM5	183 aa		11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	RPL18A	Q02543	176 aa	Known RBP	11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179		U3KQE9	123 aa		11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	FN1	P02751	2386 aa	Known RBP	11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179		A0A0J9YX75	114 aa		11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	MRPS36	P82909	103 aa	Known RBP	11.5	□□□□□ -0.57
SYNRG-223	ENST00000616179	EBI3	Q14213	229 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179		Q9UF83	564 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	C4orf26	Q17RF5	130 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	CSMD1	Q96PZ7	3565 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	PKIG	Q9Y2B9	76 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	ACACB	O00763	2458 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	SMG1	Q96Q15	3661 aa	Known RBP	11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	SIRPD	Q9H106	197 aa		11.49	□□□□□ -0.57
SYNRG-223	ENST00000616179	TRGV2	A0A075B6R0	118 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	KLLN	B2CW77	178 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	TNRC18	O15417	2968 aa	Predicted RBP	11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	C6orf226	Q5I0X4	101 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	HIST2H2BC	Q6DN03	193 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	HIST2H2BD	Q6DRA6	164 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	SERP2	Q8N6R1	65 aa		11.48	□□□□□ -0.57
SYNRG-223	ENST00000616179	LAMTOR3	Q9UHA4	124 aa		11.47	□□□□□ -0.57
SYNRG-223	ENST00000616179	LRBA	P50851	2863 aa		11.46	□□□□□ -0.57
SYNRG-223	ENST00000616179	C5orf38	Q86SI9	138 aa		11.46	□□□□□ -0.57
SYNRG-223	ENST00000616179	NDUFA1	O15239	70 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	CITED2	Q99967	270 aa	Predicted RBP	11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	COX6A2	Q02221	97 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	C11orf44	Q8N8P7	122 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	IGHV4-38-2	P0DP08	117 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	NCOR2	Q9Y618	2525 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	RBM3	P98179	157 aa	Known RBP	11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	OVOL2	Q9BRP0	275 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	UBL5	Q9BZL1	73 aa		11.45	□□□□□ -0.58
SYNRG-223	ENST00000616179	APRG1	Q8IVJ8	170 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	CACNA1A	O00555	2505 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	TMEM258	P61165	79 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	DEFB136	Q30KP8	78 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	C10orf99	Q6UWK7	81 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	ENHO	Q6UWT2	76 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	LITAF	Q99732	161 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	UBE2D4	Q9Y2X8	147 aa		11.44	□□□□□ -0.58
SYNRG-223	ENST00000616179	C9orf85	Q96MD7	179 aa		11.43	□□□□□ -0.58
SYNRG-223	ENST00000616179		Q8NA96	180 aa		11.43	□□□□□ -0.58
SYNRG-223	ENST00000616179	S100A7L2	Q5SY68	101 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	TMEM86B	Q8N661	226 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	FAM218A	Q96MZ4	157 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	ORMDL1	Q9P0S3	153 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	PYGO1	Q9Y3Y4	419 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	JMJD1C	Q15652	2540 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	LINC00846	Q9NV44	126 aa		11.42	□□□□□ -0.58
SYNRG-223	ENST00000616179	CXCL5	P42830	114 aa		11.41	□□□□□ -0.58
SYNRG-223	ENST00000616179	HILS1	P60008	231 aa		11.41	□□□□□ -0.58
SYNRG-223	ENST00000616179	WFDC11	Q8NEX6	87 aa		11.41	□□□□□ -0.58
SYNRG-223	ENST00000616179	DCANP1	Q8TF63	244 aa		11.41	□□□□□ -0.58
SYNRG-223	ENST00000616179		A0A0U1RQV1	116 aa		11.41	□□□□□ -0.58
SYNRG-223	ENST00000616179	CLPSL2	Q6UWE3	100 aa		11.4	□□□□□ -0.58
SYNRG-223	ENST00000616179		A0A087WYN8	130 aa		11.4	□□□□□ -0.58
SYNRG-223	ENST00000616179	MRAP	Q8TCY5	172 aa		11.4	□□□□□ -0.58
SYNRG-223	ENST00000616179		Q6ZSN1	163 aa		11.4	□□□□□ -0.59
SYNRG-223	ENST00000616179	PIMREG	Q9BSJ6	248 aa		11.39	□□□□□ -0.59
SYNRG-223	ENST00000616179	CCDC168	Q8NDH2	2452 aa		11.39	□□□□□ -0.59
SYNRG-223	ENST00000616179	TRGV4	A0A0C4DH28	118 aa		11.39	□□□□□ -0.59
SYNRG-223	ENST00000616179	DPH3	Q96FX2	82 aa		11.39	□□□□□ -0.59
SYNRG-223	ENST00000616179		A0A1W2PRX2	142 aa		11.39	□□□□□ -0.59
SYNRG-223	ENST00000616179	DMXL1	Q9Y485	3027 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	STH	Q8IWL8	128 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	SMIM11B	Q8TCY0	68 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	PSMB8	P28062	276 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	SNURF	Q9Y675	71 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	IGHG2	P01859	326 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179	MUC3A	Q02505	3323 aa		11.38	□□□□□ -0.59
SYNRG-223	ENST00000616179		H0YGX0	51 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	CDSN	Q15517	529 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	SOSTDC1	Q6X4U4	206 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	MUC6	Q6W4X9	2439 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	TIMM17B	O60830	172 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	CRYGA	P11844	174 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	LINC00242	Q5T6M2	205 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	COX7B2	Q8TF08	81 aa		11.37	□□□□□ -0.59
SYNRG-223	ENST00000616179	INS	P01308	110 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	MAPK1IP1L	Q8NDC0	245 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	BRK1	Q8WUW1	75 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	CHCHD7	Q9BUK0	85 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	FAM236D	A0A1B0GTK5	79 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	FAM236C	P0DP71	79 aa		11.36	□□□□□ -0.59
SYNRG-223	ENST00000616179	HIVEP3	Q5T1R4	2406 aa		11.35	□□□□□ -0.59
SYNRG-223	ENST00000616179	TRAV25	A0A0B4J276	109 aa		11.35	□□□□□ -0.59
SYNRG-223	ENST00000616179	XCL1	P47992	114 aa		11.35	□□□□□ -0.59
SYNRG-223	ENST00000616179	FAM19A1	Q7Z5A9	133 aa		11.35	□□□□□ -0.59
SYNRG-223	ENST00000616179	UPK3B	Q9BT76	320 aa		11.35	□□□□□ -0.59
SYNRG-223	ENST00000616179	IGHV4-59	P01825	116 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms