RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 UNQ9165/PRO28630Q6UXU0 137 aa7.65□□□□□ -1.18
TNFAIP3-208ENST00000615468 Q8N2B8 174 aa7.65□□□□□ -1.18
TNFAIP3-208ENST00000615468 CITED2Q99967 270 aaPredicted RBP7.65□□□□□ -1.18
TNFAIP3-208ENST00000615468 PRIMA1Q86XR5 153 aa7.65□□□□□ -1.19
TNFAIP3-208ENST00000615468 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.19
TNFAIP3-208ENST00000615468 SETD2Q9BYW2 2564 aaPredicted RBP7.65□□□□□ -1.19
TNFAIP3-208ENST00000615468 Q8N9W7 124 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 IGKV2-29A2NJV5 120 aaPredicted RBP7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 KNCNA6PVL3 124 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 MALP21145 153 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 CDKN2A-AS1Q9UH64 79 aa7.64□□□□□ -1.19
TNFAIP3-208ENST00000615468 OXTP01178 125 aa7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 ITLN2Q8WWU7 325 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 TRBV6-5A0A0K0K1A5 114 aa7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 HRNRQ86YZ3 2850 aaPredicted RBP7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 IGHV3-38A0A0C4DH36 116 aa7.63□□□□□ -1.19
TNFAIP3-208ENST00000615468 TRBV12-3P01733 135 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 PFN2P35080 140 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 MRAPQ8TCY5 172 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 MINOS1Q5TGZ0 78 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 RHPN1-AS1Q9BWJ2 59 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 USP24Q9UPU5 2620 aa7.62□□□□□ -1.19
TNFAIP3-208ENST00000615468 BPESC1Q9GZL8 116 aa7.61□□□□□ -1.19
TNFAIP3-208ENST00000615468 FAM218AQ96MZ4 157 aa7.61□□□□□ -1.19
TNFAIP3-208ENST00000615468 GHRHP01286 108 aa7.61□□□□□ -1.19
TNFAIP3-208ENST00000615468 FAM223AQ8IWN6 122 aa7.61□□□□□ -1.19
TNFAIP3-208ENST00000615468 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
TNFAIP3-208ENST00000615468 MAPK1IP1LQ8NDC0 245 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 COPS9Q8WXC6 57 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 DOPEY1Q5JWR5 2465 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 CRPP02741 224 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 PROK1P58294 105 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1BA6NDE4 496 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1EA6NEQ0 496 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1DP0C7P1 496 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
TNFAIP3-208ENST00000615468 WFDC11Q8NEX6 87 aa7.59□□□□□ -1.19
TNFAIP3-208ENST00000615468 U3KQE9 123 aa7.59□□□□□ -1.19
TNFAIP3-208ENST00000615468 PRORYQ9H606 182 aa7.59□□□□□ -1.19
TNFAIP3-208ENST00000615468 RPL35AP18077 110 aaKnown RBP7.59□□□□□ -1.19
TNFAIP3-208ENST00000615468 Q5XG85 94 aa7.59□□□□□ -1.19
TNFAIP3-208ENST00000615468 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 J3QLI3 93 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 SOCS3O14543 225 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 ZFP36P26651 326 aaKnown RBP7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 HILS1P60008 231 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 IGHV3-16A0A0C4DH30 117 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 NCR3O14931 201 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 FHL2Q14192 279 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 BRD3OSQ6XYD6 125 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
TNFAIP3-208ENST00000615468 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 ODF3BA8MYP8 253 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 IGHV1OR15-1A0A075B7D0 117 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 NDUFA1O15239 70 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 Q8N6K4 173 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 LINC00336Q6ZUF6 198 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
TNFAIP3-208ENST00000615468 TIMM17BO60830 172 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 SLPIP03973 132 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 LY6EQ16553 131 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 HIST2H2BCQ6DN03 193 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 HIST2H2BDQ6DRA6 164 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 Q6JHZ5 121 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 LECT2O14960 151 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 FBXL19-AS1Q494R0 122 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 CELSR1Q9NYQ6 3014 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 KLLNB2CW77 178 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 SAA4P35542 130 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 CCL19Q99731 98 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 PRO0628Q9UI54 55 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 MINOS1-NBL1R4GNA1 71 aa7.56□□□□□ -1.2
TNFAIP3-208ENST00000615468 FAM222AQ5U5X8 452 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 NDUFA4O00483 81 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 IGHG2P01859 326 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 LINC00467Q9BRT7 94 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 Q9UF83 564 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
TNFAIP3-208ENST00000615468 UPK3BQ9BT76 320 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 WNK1Q9H4A3 2382 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms