RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 UBE2D2P62837 147 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 HIVEP2P31629 2446 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 K7ERU9 68 aa8.51□□□□□ -1.05
SRRT-213ENST00000611405 TIRAPP58753 221 aa8.51□□□□□ -1.05
SRRT-213ENST00000611405 SMAGPQ0VAQ4 97 aa8.51□□□□□ -1.05
SRRT-213ENST00000611405 TRGV2A0A075B6R0 118 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE7O76087 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 VSIG2Q96IQ7 327 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 CSDC2Q9Y534 153 aaKnown RBP8.5□□□□□ -1.05
SRRT-213ENST00000611405 SETD2Q9BYW2 2564 aaPredicted RBP8.5□□□□□ -1.05
SRRT-213ENST00000611405 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE12JA6NER3 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE4Q13068 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE5Q13069 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 GAGE13Q4V321 117 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
SRRT-213ENST00000611405 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 APOMO95445 188 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 TRBV6-4A0A1B0GX49 114 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 NTM-AS1Q6ZSK4 140 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
SRRT-213ENST00000611405 TSPAN13O95857 204 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 CFC1BP0CG36 223 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 CFC1P0CG37 223 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 F8W1H4 67 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 INSL3P51460 131 aa8.48□□□□□ -1.05
SRRT-213ENST00000611405 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
SRRT-213ENST00000611405 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 HERVK_113P63121 156 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 TRGV4A0A0C4DH28 118 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
SRRT-213ENST00000611405 SETXQ7Z333 2677 aaKnown RBP8.46□□□□□ -1.05
SRRT-213ENST00000611405 H3BMG7 143 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 CDKN2A-AS1Q9UH64 79 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 PRO1854Q9UHT4 67 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 H7C423 109 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 C9orf66Q5T8R8 295 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.06
SRRT-213ENST00000611405 UBE2L6O14933 153 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 LITAFQ99732 161 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
SRRT-213ENST00000611405 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 FHL2Q14192 279 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
SRRT-213ENST00000611405 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
SRRT-213ENST00000611405 HERV-K104P63124 156 aa8.44□□□□□ -1.06
SRRT-213ENST00000611405 COX6A2Q02221 97 aa8.44□□□□□ -1.06
SRRT-213ENST00000611405 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
SRRT-213ENST00000611405 KIR2DL5BQ8NHK3 375 aa8.44□□□□□ -1.06
SRRT-213ENST00000611405 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 G3V4G9 280 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 TIMM17BO60830 172 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 CRLF1O75462 422 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 VPS25Q9BRG1 176 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 JMJD1CQ15652 2540 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 GCN1Q92616 2671 aaKnown RBP8.43□□□□□ -1.06
SRRT-213ENST00000611405 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 SMIM9A6NGZ8 99 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.43□□□□□ -1.06
SRRT-213ENST00000611405 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
SRRT-213ENST00000611405 A8MZ25 164 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 NDUFA1O15239 70 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 WIPF1O43516 503 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 WFDC2Q14508 124 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
SRRT-213ENST00000611405 MIAQ16674 131 aa8.42□□□□□ -1.06
SRRT-213ENST00000611405 TRBV20-1A0A075B6N2 111 aa8.42□□□□□ -1.06
SRRT-213ENST00000611405 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
SRRT-213ENST00000611405 PSMB2P49721 201 aa8.42□□□□□ -1.06
SRRT-213ENST00000611405 HECTD1Q9ULT8 2610 aa8.42□□□□□ -1.06
SRRT-213ENST00000611405 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
SRRT-213ENST00000611405 PRSS2P07478 247 aa8.41□□□□□ -1.06
SRRT-213ENST00000611405 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
SRRT-213ENST00000611405 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
SRRT-213ENST00000611405 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
SRRT-213ENST00000611405 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 RNF183Q96D59 192 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 X6R8D5 127 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 IFITM1P13164 125 aa8.4□□□□□ -1.06
SRRT-213ENST00000611405 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms