RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 IGLV5-39A0A0G2JS06 123 aa6.2□□□□□ -1.42
COMMD3-215ENST00000602574 ELOF1P60002 83 aaKnown RBP6.2□□□□□ -1.42
COMMD3-215ENST00000602574 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
COMMD3-215ENST00000602574 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 SUMO4Q6EEV6 95 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 LEAP2Q969E1 77 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 TFF1P04155 84 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 GNLYP22749 145 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 C9orf116Q5BN46 136 aaPredicted RBP6.19□□□□□ -1.42
COMMD3-215ENST00000602574 ZGRF1Q86YA3 2104 aa6.19□□□□□ -1.42
COMMD3-215ENST00000602574 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
COMMD3-215ENST00000602574 H3BQ85 93 aa6.18□□□□□ -1.42
COMMD3-215ENST00000602574 C18orf65Q6ZTR6 163 aa6.18□□□□□ -1.42
COMMD3-215ENST00000602574 IGHV3-64DA0A0J9YX35 117 aa6.18□□□□□ -1.42
COMMD3-215ENST00000602574 K7EIM0 57 aa6.18□□□□□ -1.42
COMMD3-215ENST00000602574 PRM2P04554 102 aa6.18□□□□□ -1.42
COMMD3-215ENST00000602574 CACNA1EQ15878 2313 aa6.17□□□□□ -1.42
COMMD3-215ENST00000602574 HAMPP81172 84 aa6.17□□□□□ -1.42
COMMD3-215ENST00000602574 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
COMMD3-215ENST00000602574 LY6G6DO95868 133 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 MOBPQ13875 183 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 PRR14LQ5THK1 2151 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 IGHV3OR16-9A0A0B4J2B5 98 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 DEFB114Q30KQ6 69 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 FAM104AQ969W3 186 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 Q9BRP9 147 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 KAAG1Q9UBP8 84 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 X6R8D5 127 aa6.16□□□□□ -1.42
COMMD3-215ENST00000602574 PRAC2D3DTV9 90 aa6.15□□□□□ -1.42
COMMD3-215ENST00000602574 RPL36AP83881 106 aaKnown RBP6.15□□□□□ -1.42
COMMD3-215ENST00000602574 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
COMMD3-215ENST00000602574 A0A0A0MQY5 61 aa6.15□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV3-21A0A0B4J1V1 117 aa6.15□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.43
COMMD3-215ENST00000602574 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.43
COMMD3-215ENST00000602574 CENPFP49454 3210 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 NAV3Q8IVL0 2385 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 C19orf84I3L1E1 186 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 NDUFB1O75438 58 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV1-46P01743 117 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 SVILO95425 2214 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 SDK2Q58EX2 2172 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 A6NED7 52 aa6.14□□□□□ -1.43
COMMD3-215ENST00000602574 PRB4P10163 310 aaPredicted RBP6.13□□□□□ -1.43
COMMD3-215ENST00000602574 RNASE3P12724 160 aaKnown RBP6.13□□□□□ -1.43
COMMD3-215ENST00000602574 KNL1Q8NG31 2342 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 BRWD1Q9NSI6 2320 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 MED13Q9UHV7 2174 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 C19orf54Q5BKX5 351 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 Q6ZTI0 123 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 CNEP1R1Q8N9A8 125 aa6.13□□□□□ -1.43
COMMD3-215ENST00000602574 CADP27708 2225 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 M0QY20 66 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV4-31P0DP07 118 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 PRR3P79522 188 aaKnown RBP6.12□□□□□ -1.43
COMMD3-215ENST00000602574 Q8N814 137 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 HTTP42858 3142 aa6.12□□□□□ -1.43
COMMD3-215ENST00000602574 KLK9Q2XQG4 91 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 KLK9Q9UKQ9 250 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 CEP350Q5VT06 3117 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV1-8P0DP01 117 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 FBXL19-AS1Q494R0 122 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 PLXNB1O43157 2135 aa6.11□□□□□ -1.43
COMMD3-215ENST00000602574 NTM-AS1Q6ZSK4 140 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 ZFAND2AQ8N6M9 145 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 IGHV1-3A0A0C4DH29 117 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 IGLV1-47P01700 117 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 SLPIP03973 132 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 C6orf99Q4VX62 202 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 NPBQ8NG41 125 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 CDKN2A-AS1Q9UH64 79 aa6.1□□□□□ -1.43
COMMD3-215ENST00000602574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.09□□□□□ -1.43
COMMD3-215ENST00000602574 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
COMMD3-215ENST00000602574 PRR9Q5T870 116 aa6.09□□□□□ -1.43
COMMD3-215ENST00000602574 FAM74A4Q5TZK3 123 aa6.09□□□□□ -1.43
COMMD3-215ENST00000602574 CCL3L1P16619 93 aa6.09□□□□□ -1.44
COMMD3-215ENST00000602574 RNASE13Q5GAN3 156 aaKnown RBP6.09□□□□□ -1.44
COMMD3-215ENST00000602574 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.44
COMMD3-215ENST00000602574 FDCSPQ8NFU4 85 aa6.09□□□□□ -1.44
COMMD3-215ENST00000602574 IGLV11-55A0A075B6I3 123 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 DNAJC13O75165 2243 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 F5H697 171 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 DEFB108BQ8NET1 73 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 CELA1Q9UNI1 258 aa6.08□□□□□ -1.44
COMMD3-215ENST00000602574 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
COMMD3-215ENST00000602574 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
COMMD3-215ENST00000602574 ZNF843Q8N446 348 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms