RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
SHKBP1-202ENST00000593764 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 F8W036 122 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 S100A8P05109 93 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 CNBPP62633 177 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
SHKBP1-202ENST00000593764 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 FCER1GP30273 86 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
SHKBP1-202ENST00000593764 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.5
SHKBP1-202ENST00000593764 D6R8Y8 96 aa11.9□□□□□ -0.5
SHKBP1-202ENST00000593764 FOXI1Q12951 378 aa11.9□□□□□ -0.5
SHKBP1-202ENST00000593764 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
SHKBP1-202ENST00000593764 ANAPC16Q96DE5 110 aa11.9□□□□□ -0.5
SHKBP1-202ENST00000593764 FLG2Q5D862 2391 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-202ENST00000593764 MT-ND4LP03901 98 aa11.89□□□□□ -0.51
SHKBP1-202ENST00000593764 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
SHKBP1-202ENST00000593764 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-202ENST00000593764 MYCBP2O75592 4640 aa11.88□□□□□ -0.51
SHKBP1-202ENST00000593764 NPYP01303 97 aa11.88□□□□□ -0.51
SHKBP1-202ENST00000593764 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
SHKBP1-202ENST00000593764 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
SHKBP1-202ENST00000593764 PANO1I0J062 215 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 CCL25O15444 150 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 PPBPP02775 128 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 XCL1P47992 114 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-202ENST00000593764 PHOX2AO14813 284 aa11.86□□□□□ -0.51
SHKBP1-202ENST00000593764 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
SHKBP1-202ENST00000593764 HIGD2BQ4VC39 106 aa11.85□□□□□ -0.51
SHKBP1-202ENST00000593764 UQCC3Q6UW78 93 aa11.85□□□□□ -0.51
SHKBP1-202ENST00000593764 ORMDL3Q8N138 153 aa11.85□□□□□ -0.51
SHKBP1-202ENST00000593764 TIMM21Q9BVV7 248 aa11.85□□□□□ -0.51
SHKBP1-202ENST00000593764 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-202ENST00000593764 TMEM218A2RU14 115 aa11.84□□□□□ -0.51
SHKBP1-202ENST00000593764 SS18Q15532 418 aa11.84□□□□□ -0.51
SHKBP1-202ENST00000593764 TMEM136Q6ZRR5 245 aa11.84□□□□□ -0.51
SHKBP1-202ENST00000593764 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 TCAPO15273 167 aa11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 RNASE13Q5GAN3 156 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 FAM104AQ969W3 186 aa11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 PRELID3AQ96N28 172 aa11.83□□□□□ -0.52
SHKBP1-202ENST00000593764 IGHV3-64A0A075B6Q5 118 aa11.82□□□□□ -0.52
SHKBP1-202ENST00000593764 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-202ENST00000593764 SMAGPQ0VAQ4 97 aa11.82□□□□□ -0.52
SHKBP1-202ENST00000593764 Q6ZUT4 128 aa11.82□□□□□ -0.52
SHKBP1-202ENST00000593764 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
SHKBP1-202ENST00000593764 PRSS47A8MTI9 375 aa11.8□□□□□ -0.52
SHKBP1-202ENST00000593764 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
SHKBP1-202ENST00000593764 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
SHKBP1-202ENST00000593764 IMMP2LQ96T52 175 aa11.79□□□□□ -0.52
SHKBP1-202ENST00000593764 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 CHTF8P0CG12 524 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 LINC00526Q96FQ7 95 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 SEC11CQ9BY50 192 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
SHKBP1-202ENST00000593764 COX6A2Q02221 97 aa11.77□□□□□ -0.53
SHKBP1-202ENST00000593764 HERC1Q15751 4861 aa11.77□□□□□ -0.53
SHKBP1-202ENST00000593764 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 RAB5AP20339 215 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 MRPS36P82909 103 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 SPACA4Q8TDM5 124 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 DMBT1Q9UGM3 2413 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-202ENST00000593764 MAP1LC3AQ9H492 121 aa11.75□□□□□ -0.53
SHKBP1-202ENST00000593764 A0A087WYN8 130 aa11.74□□□□□ -0.53
SHKBP1-202ENST00000593764 COX7A2LO14548 114 aa11.74□□□□□ -0.53
SHKBP1-202ENST00000593764 PKHD1L1Q86WI1 4243 aa11.74□□□□□ -0.53
SHKBP1-202ENST00000593764 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
SHKBP1-202ENST00000593764 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
SHKBP1-202ENST00000593764 Q8N8P6 123 aa11.73□□□□□ -0.53
SHKBP1-202ENST00000593764 PYGO1Q9Y3Y4 419 aa11.73□□□□□ -0.53
SHKBP1-202ENST00000593764 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
SHKBP1-202ENST00000593764 MALP21145 153 aa11.72□□□□□ -0.53
SHKBP1-202ENST00000593764 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
SHKBP1-202ENST00000593764 TRAV9-1A0A075B6T8 112 aa11.71□□□□□ -0.53
SHKBP1-202ENST00000593764 CARD19Q96LW7 228 aa11.71□□□□□ -0.53
SHKBP1-202ENST00000593764 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
SHKBP1-202ENST00000593764 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
SHKBP1-202ENST00000593764 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
SHKBP1-202ENST00000593764 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
SHKBP1-202ENST00000593764 IFI27P40305 119 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-202ENST00000593764 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-202ENST00000593764 SYCNQ0VAF6 134 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms