RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 LYSTQ99698 3801 aa10.25□□□□□ -0.77
ATG4D-211ENST00000589753 NUPR1O60356 82 aa10.24□□□□□ -0.77
ATG4D-211ENST00000589753 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
ATG4D-211ENST00000589753 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
ATG4D-211ENST00000589753 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
ATG4D-211ENST00000589753 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
ATG4D-211ENST00000589753 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 CRPP02741 224 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
ATG4D-211ENST00000589753 REG3AQ06141 175 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 COA6Q5JTJ3 125 aaKnown RBP10.23□□□□□ -0.77
ATG4D-211ENST00000589753 Q6ZUT4 128 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 ERASQ7Z444 233 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 TIMM17AQ99595 171 aa10.23□□□□□ -0.77
ATG4D-211ENST00000589753 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
ATG4D-211ENST00000589753 IGLV4-3A0A075B6K6 122 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 NPSP0C0P6 89 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 ENHOQ6UWT2 76 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 FAM104AQ969W3 186 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
ATG4D-211ENST00000589753 TRAV8-3A0A0A6YYJ7 113 aa10.21□□□□□ -0.77
ATG4D-211ENST00000589753 RNASE13Q5GAN3 156 aaKnown RBP10.21□□□□□ -0.77
ATG4D-211ENST00000589753 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
ATG4D-211ENST00000589753 MIAQ16674 131 aa10.2□□□□□ -0.78
ATG4D-211ENST00000589753 PAPPA-AS1Q5QFB9 102 aa10.2□□□□□ -0.78
ATG4D-211ENST00000589753 Q6ZN92 141 aa10.2□□□□□ -0.78
ATG4D-211ENST00000589753 Q9HAA7 133 aa10.2□□□□□ -0.78
ATG4D-211ENST00000589753 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
ATG4D-211ENST00000589753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
ATG4D-211ENST00000589753 ATP5LO75964 103 aa10.19□□□□□ -0.78
ATG4D-211ENST00000589753 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
ATG4D-211ENST00000589753 S100A6P06703 90 aa10.18□□□□□ -0.78
ATG4D-211ENST00000589753 C1orf134Q5TEV5 83 aa10.18□□□□□ -0.78
ATG4D-211ENST00000589753 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
ATG4D-211ENST00000589753 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
ATG4D-211ENST00000589753 VCX2Q9H322 139 aa10.18□□□□□ -0.78
ATG4D-211ENST00000589753 KMT2CQ8NEZ4 4911 aaKnown RBP10.17□□□□□ -0.78
ATG4D-211ENST00000589753 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 LEPROTL1O95214 131 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 RMI2Q96E14 147 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 AMELXQ99217 191 aa10.17□□□□□ -0.78
ATG4D-211ENST00000589753 DNAH1Q9P2D7 4330 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 SS18Q15532 418 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 C2orf88Q9BSF0 95 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 C1orf43Q9BWL3 253 aa10.16□□□□□ -0.78
ATG4D-211ENST00000589753 FABP4P15090 132 aa10.15□□□□□ -0.78
ATG4D-211ENST00000589753 IFI27L1Q96BM0 104 aa10.15□□□□□ -0.78
ATG4D-211ENST00000589753 TM2D2Q9BX73 214 aa10.15□□□□□ -0.78
ATG4D-211ENST00000589753 HSPB8Q9UJY1 196 aa10.15□□□□□ -0.78
ATG4D-211ENST00000589753 COX11Q9Y6N1 276 aa10.15□□□□□ -0.78
ATG4D-211ENST00000589753 CCL25O15444 150 aa10.14□□□□□ -0.79
ATG4D-211ENST00000589753 PMVKQ15126 192 aa10.14□□□□□ -0.79
ATG4D-211ENST00000589753 PRSS1P07477 247 aa10.13□□□□□ -0.79
ATG4D-211ENST00000589753 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-211ENST00000589753 CHCHD10Q8WYQ3 142 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-211ENST00000589753 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
ATG4D-211ENST00000589753 PSCAO43653 123 aa10.12□□□□□ -0.79
ATG4D-211ENST00000589753 XCL1P47992 114 aa10.12□□□□□ -0.79
ATG4D-211ENST00000589753 UBE2D1P51668 147 aa10.12□□□□□ -0.79
ATG4D-211ENST00000589753 SNRPEP62304 92 aaKnown RBP10.12□□□□□ -0.79
ATG4D-211ENST00000589753 HIST3H2BBQ8N257 126 aa10.12□□□□□ -0.79
ATG4D-211ENST00000589753 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-211ENST00000589753 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
ATG4D-211ENST00000589753 PRSS29PA6NIE9 313 aa10.11□□□□□ -0.79
ATG4D-211ENST00000589753 S100A2P29034 98 aa10.11□□□□□ -0.79
ATG4D-211ENST00000589753 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
ATG4D-211ENST00000589753 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
ATG4D-211ENST00000589753 C5orf52A6NGY3 159 aa10.1□□□□□ -0.79
ATG4D-211ENST00000589753 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
ATG4D-211ENST00000589753 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
ATG4D-211ENST00000589753 HYDINQ4G0P3 5121 aa10.1□□□□□ -0.79
ATG4D-211ENST00000589753 KMT2AQ03164 3969 aa10.09□□□□□ -0.79
ATG4D-211ENST00000589753 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
ATG4D-211ENST00000589753 RTL8CO15255 209 aa10.09□□□□□ -0.79
ATG4D-211ENST00000589753 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
ATG4D-211ENST00000589753 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
ATG4D-211ENST00000589753 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 H0Y8G0 127 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 SEC11AP67812 179 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 FOXI1Q12951 378 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 DNAH6Q9C0G6 4158 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 RYR3Q15413 4870 aa10.08□□□□□ -0.8
ATG4D-211ENST00000589753 SACSQ9NZJ4 4579 aa10.07□□□□□ -0.8
ATG4D-211ENST00000589753 HIST1H2BLQ99880 126 aa10.07□□□□□ -0.8
ATG4D-211ENST00000589753 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms