RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
TPM4-209ENST00000588483 IFITM2Q01629 132 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 MRPL54Q6P161 138 aaKnown RBP6.78□□□□□ -1.32
TPM4-209ENST00000588483 UQCC3Q6UW78 93 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 BTF3L4Q96K17 158 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 KIR2DL4Q99706 377 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 CDC42SE2Q9NRR3 84 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 MT-ND4LP03901 98 aa6.77□□□□□ -1.33
TPM4-209ENST00000588483 CKS2P33552 79 aa6.77□□□□□ -1.33
TPM4-209ENST00000588483 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
TPM4-209ENST00000588483 LINC00959A0A1B0GUT2 108 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 D6R8Y8 96 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 TNFRSF6BO95407 300 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 FCER1GP30273 86 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 SMAGPQ0VAQ4 97 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 FOXI1Q12951 378 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
TPM4-209ENST00000588483 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 UBE2D4Q9Y2X8 147 aa6.76□□□□□ -1.33
TPM4-209ENST00000588483 FLG2Q5D862 2391 aaPredicted RBP6.75□□□□□ -1.33
TPM4-209ENST00000588483 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
TPM4-209ENST00000588483 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 CCL25O15444 150 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 SLPIP03973 132 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 ADCYAP1P18509 176 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
TPM4-209ENST00000588483 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.74□□□□□ -1.33
TPM4-209ENST00000588483 IGKV3OR2-268A0A0C4DH90 116 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 NPYP01303 97 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 IMMP2LQ96T52 175 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
TPM4-209ENST00000588483 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
TPM4-209ENST00000588483 PLA2G1BP04054 148 aaKnown RBP6.73□□□□□ -1.33
TPM4-209ENST00000588483 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
TPM4-209ENST00000588483 TMEM136Q6ZRR5 245 aa6.73□□□□□ -1.33
TPM4-209ENST00000588483 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
TPM4-209ENST00000588483 HERC1Q15751 4861 aa6.73□□□□□ -1.33
TPM4-209ENST00000588483 PKHD1L1Q86WI1 4243 aa6.73□□□□□ -1.33
TPM4-209ENST00000588483 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 C1orf196B1AJZ1 125 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 XCL1P47992 114 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 SS18Q15532 418 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 PRELID3AQ96N28 172 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 SEC11CQ9BY50 192 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
TPM4-209ENST00000588483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
TPM4-209ENST00000588483 TRAV9-1A0A075B6T8 112 aa6.71□□□□□ -1.34
TPM4-209ENST00000588483 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
TPM4-209ENST00000588483 PANO1I0J062 215 aa6.71□□□□□ -1.34
TPM4-209ENST00000588483 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.34
TPM4-209ENST00000588483 Q6ZUT4 128 aa6.71□□□□□ -1.34
TPM4-209ENST00000588483 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
TPM4-209ENST00000588483 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
TPM4-209ENST00000588483 HIGD2BQ4VC39 106 aa6.7□□□□□ -1.34
TPM4-209ENST00000588483 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
TPM4-209ENST00000588483 PYGO1Q9Y3Y4 419 aa6.7□□□□□ -1.34
TPM4-209ENST00000588483 K7EMI3 77 aa6.69□□□□□ -1.34
TPM4-209ENST00000588483 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
TPM4-209ENST00000588483 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
TPM4-209ENST00000588483 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
TPM4-209ENST00000588483 RAB5AP20339 215 aa6.68□□□□□ -1.34
TPM4-209ENST00000588483 MAP1LC3AQ9H492 121 aa6.68□□□□□ -1.34
TPM4-209ENST00000588483 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
TPM4-209ENST00000588483 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 COX7A2LO14548 114 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 NPSP0C0P6 89 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
TPM4-209ENST00000588483 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 Q8N8P6 123 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
TPM4-209ENST00000588483 CARHSP1Q9Y2V2 147 aaKnown RBP6.67□□□□□ -1.34
TPM4-209ENST00000588483 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
TPM4-209ENST00000588483 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
TPM4-209ENST00000588483 COX6A2Q02221 97 aa6.66□□□□□ -1.34
TPM4-209ENST00000588483 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
TPM4-209ENST00000588483 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 A0A087WYN8 130 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 CHTF8P0CG12 524 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 SYCNQ0VAF6 134 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 RHEBQ15382 184 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms