RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 C1QTNF4Q9BXJ3 329 aa4.15□□□□□ -1.75
SDF2-206ENST00000587788 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
SDF2-206ENST00000587788 TRBV7-3A0A075B6L6 115 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 K7ERU9 68 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 LEPROTO15243 131 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 PRB2P02812 416 aaPredicted RBP4.14□□□□□ -1.75
SDF2-206ENST00000587788 P0DMU3 169 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 FAM231AP0DMU4 169 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 FAM231CP0DMU5 169 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 HTN1P15515 57 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 RPL39P62891 51 aaKnown RBP4.14□□□□□ -1.75
SDF2-206ENST00000587788 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
SDF2-206ENST00000587788 COTL1Q14019 142 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 ODF3L2Q3SX64 289 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 TMEM170BQ5T4T1 132 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 C11orf72Q8NBR9 251 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 AMELXQ99217 191 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
SDF2-206ENST00000587788 SPCS1Q9Y6A9 102 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 MUC4Q99102 2169 aa4.14□□□□□ -1.75
SDF2-206ENST00000587788 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 J3QQQ9 107 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
SDF2-206ENST00000587788 MRPS36P82909 103 aaKnown RBP4.13□□□□□ -1.75
SDF2-206ENST00000587788 DAZ2Q13117 558 aaKnown RBP4.13□□□□□ -1.75
SDF2-206ENST00000587788 RRN3P1Q2M238 152 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 SLC25A29Q8N8R3 303 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 TMEM263Q8WUH6 116 aaKnown RBP4.13□□□□□ -1.75
SDF2-206ENST00000587788 PHLDA1Q8WV24 401 aaPredicted RBP4.13□□□□□ -1.75
SDF2-206ENST00000587788 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 TTTY13Q9BZ97 58 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 NOTCH3Q9UM47 2321 aa4.13□□□□□ -1.75
SDF2-206ENST00000587788 MGAM2Q2M2H8 2515 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 TRAV4A0A0B4J268 109 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 A0A0J9YY99 117 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 IGLL5B9A064 214 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 F8W1H4 67 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 AZU1P20160 251 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 RPL36AP83881 106 aaKnown RBP4.12□□□□□ -1.75
SDF2-206ENST00000587788 FOXI1Q12951 378 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 OCIAD2Q56VL3 154 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 KPRPQ5T749 579 aaPredicted RBP4.12□□□□□ -1.75
SDF2-206ENST00000587788 DGAT2L7PQ6IED9 249 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 DAZ4Q86SG3 579 aaKnown RBP4.12□□□□□ -1.75
SDF2-206ENST00000587788 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 RPL36ALQ969Q0 106 aaKnown RBP4.12□□□□□ -1.75
SDF2-206ENST00000587788 C16orf74Q96GX8 76 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 ZNF479Q96JC4 524 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 DAZ3Q9NR90 486 aaKnown RBP4.12□□□□□ -1.75
SDF2-206ENST00000587788 XCL2Q9UBD3 114 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 MEGF8Q7Z7M0 2845 aa4.12□□□□□ -1.75
SDF2-206ENST00000587788 DNAH3Q8TD57 4116 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 TMEM238C9JI98 176 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 H7C423 109 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 UBE2D1P51668 147 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 KRTAP10-11P60412 298 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 RPL24P83731 157 aaKnown RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 KIR2DL5BQ8NHK3 375 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 RNASE8Q8TDE3 154 aaKnown RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 CHCHD7Q9BUK0 85 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 MRPL16Q9NX20 251 aaKnown RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 UBE2D4Q9Y2X8 147 aa4.11□□□□□ -1.75
SDF2-206ENST00000587788 CSDC2Q9Y534 153 aaKnown RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
SDF2-206ENST00000587788 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
SDF2-206ENST00000587788 A0A0J9YXV3 536 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 FAM19A3Q7Z5A8 133 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 COPS9Q8WXC6 57 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 RNF183Q96D59 192 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 OVOL2Q9BRP0 275 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 GTSF1LQ9H1H1 148 aa4.1□□□□□ -1.75
SDF2-206ENST00000587788 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
SDF2-206ENST00000587788 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 IGHV1-58A0A0C4DH39 117 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 A0A0J9YXY3 114 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 TRBV6-4A0A1B0GX49 114 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 SMIM9A6NGZ8 99 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 J3QR89 54 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 K7EQD1 137 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 K7ERJ3 54 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 TIMM17BO60830 172 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 IGHV3-30P01768 117 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 IGHV3-30-5P0DP03 117 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 EMP1P54849 157 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 APOC4P55056 127 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 RBX1P62877 108 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 HERVK_113P63121 156 aa4.09□□□□□ -1.75
SDF2-206ENST00000587788 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms