RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 FER1L5A0AVI2 2057 aa4.26□□□□□ -1.73
SMAD4-203ENST00000585448 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 TRBV6-8A0A0A6YYG3 113 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 IGHV3-21A0A0B4J1V1 117 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 K7EIM0 57 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 IGHV3-9P01782 118 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 CCL3P10147 92 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 LINC00315P59091 139 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 MRGPRG-AS1Q2M3A8 158 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 INTS1Q8N201 2190 aaKnown RBP4.25□□□□□ -1.73
SMAD4-203ENST00000585448 ESPL1Q14674 2120 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 KNTC1P50748 2209 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 NACAE9PAV3 2078 aa4.25□□□□□ -1.73
SMAD4-203ENST00000585448 MED12Q93074 2177 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 A0A087WYN8 130 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 SPTY2D1-AS1A0A0U1RR47 76 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 BPY2O14599 106 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 LECT2O14960 151 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 PSPHP1O15172 72 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 TFF1P04155 84 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
SMAD4-203ENST00000585448 IGFL3Q6UXB1 125 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 CACNA1DQ01668 2161 aa4.24□□□□□ -1.73
SMAD4-203ENST00000585448 DIDO1Q9BTC0 2240 aaKnown RBP4.23□□□□□ -1.73
SMAD4-203ENST00000585448 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-203ENST00000585448 C16orf90A8MZG2 172 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 HCG22E2RYF7 251 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 GNRH2O43555 120 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 PSCAO43653 123 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 HAMPP81172 84 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 KIAA0087Q14695 138 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 Q5VV11 94 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 C1orf64Q8NEQ6 169 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 SMIM11BQ8TCY0 68 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 ZNF407Q9C0G0 2248 aa4.23□□□□□ -1.73
SMAD4-203ENST00000585448 IGHV1OR15-1A0A075B7D0 117 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 A0A087X002 238 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 IGHV3-64DA0A0J9YX35 117 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 ELOF1P60002 83 aaKnown RBP4.22□□□□□ -1.73
SMAD4-203ENST00000585448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 Q75L30 129 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 C11orf72Q8NBR9 251 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 Q9H8V8 135 aa4.22□□□□□ -1.73
SMAD4-203ENST00000585448 POLEQ07864 2286 aa4.21□□□□□ -1.73
SMAD4-203ENST00000585448 TRBV10-1A0A0K0K1A3 114 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 C5orf67F2Z3F1 127 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 MP68P56378 58 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 C9orf66Q5T8R8 295 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 Q6ZQT0 140 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SMAD4-203ENST00000585448 IGHV1-3A0A0C4DH29 117 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 LCE6AA0A183 80 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 M0QY20 66 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 NDUFB1O75438 58 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 RNASE3P12724 160 aaKnown RBP4.2□□□□□ -1.74
SMAD4-203ENST00000585448 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 GAFA1Q96PS6 74 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
SMAD4-203ENST00000585448 PRRC2AP48634 2157 aaKnown RBP4.2□□□□□ -1.74
SMAD4-203ENST00000585448 DSCAML1Q8TD84 2053 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 C10orf142B7Z368 130 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 LY6HO94772 140 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 LY6G6DO95868 133 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 DEFB114Q30KQ6 69 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 ZFAND2AQ8N6M9 145 aa4.19□□□□□ -1.74
SMAD4-203ENST00000585448 RTTNQ86VV8 2226 aa4.18□□□□□ -1.74
SMAD4-203ENST00000585448 IGLV11-55A0A075B6I3 123 aa4.18□□□□□ -1.74
SMAD4-203ENST00000585448 IGKV3-20P01619 116 aa4.18□□□□□ -1.74
SMAD4-203ENST00000585448 PRB4P10163 310 aaPredicted RBP4.18□□□□□ -1.74
SMAD4-203ENST00000585448 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
SMAD4-203ENST00000585448 Q8N814 137 aa4.18□□□□□ -1.74
SMAD4-203ENST00000585448 IGKV2-28A0A075B6P5 120 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 IGHV3-38A0A0C4DH36 116 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 LOC101927531A0A1B0GV80 90 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 IGKV2D-28P01615 120 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 PRM2P04554 102 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 LINC00313P59037 77 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-203ENST00000585448 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 ITLN2Q8WWU7 325 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-203ENST00000585448 CDKN2A-AS1Q9UH64 79 aa4.17□□□□□ -1.74
SMAD4-203ENST00000585448 A6NED7 52 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 K7EQG2 157 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 CCL24O00175 119 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 IGKV3-15P01624 115 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 PRR9Q5T870 116 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 FAM74A4Q5TZK3 123 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
SMAD4-203ENST00000585448 FAM104AQ969W3 186 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 Q9BRP9 147 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 HIGD2AQ9BW72 106 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 CDC42SE2Q9NRR3 84 aa4.16□□□□□ -1.74
SMAD4-203ENST00000585448 FREM1Q5H8C1 2179 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms