RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ORMDL3Q8N138 153 aa17.71■□□□□ 0.43
SMARCD2-210ENST00000584400 FAM30AQ9NZY2 134 aa17.71■□□□□ 0.43
SMARCD2-210ENST00000584400 GAGE12HA6NDE8 117 aa17.7■□□□□ 0.42
SMARCD2-210ENST00000584400 KRTAP17-1Q9BYP8 105 aa17.7■□□□□ 0.42
SMARCD2-210ENST00000584400 LINC01620Q4KN68 170 aa17.69■□□□□ 0.42
SMARCD2-210ENST00000584400 CHCHD10Q8WYQ3 142 aaPredicted RBP17.69■□□□□ 0.42
SMARCD2-210ENST00000584400 AP5S1Q9NUS5 200 aa17.69■□□□□ 0.42
SMARCD2-210ENST00000584400 CSDC2Q9Y534 153 aaKnown RBP17.69■□□□□ 0.42
SMARCD2-210ENST00000584400 hDV102S1A0JD36 115 aa17.68■□□□□ 0.42
SMARCD2-210ENST00000584400 ZNF664Q8N3J9 261 aa17.68■□□□□ 0.42
SMARCD2-210ENST00000584400 IMMP2LQ96T52 175 aa17.68■□□□□ 0.42
SMARCD2-210ENST00000584400 SMIM2Q9BVW6 85 aa17.68■□□□□ 0.42
SMARCD2-210ENST00000584400 CDC42SE2Q9NRR3 84 aa17.68■□□□□ 0.42
SMARCD2-210ENST00000584400 TMEM136Q6ZRR5 245 aa17.67■□□□□ 0.42
SMARCD2-210ENST00000584400 SEC11CQ9BY50 192 aa17.67■□□□□ 0.42
SMARCD2-210ENST00000584400 CTDSP1Q9GZU7 261 aa17.67■□□□□ 0.42
SMARCD2-210ENST00000584400 FAM229AH3BQW9 127 aa17.66■□□□□ 0.42
SMARCD2-210ENST00000584400 SS18Q15532 418 aa17.66■□□□□ 0.42
SMARCD2-210ENST00000584400 NPYP01303 97 aa17.65■□□□□ 0.42
SMARCD2-210ENST00000584400 ADCYAP1P18509 176 aa17.65■□□□□ 0.42
SMARCD2-210ENST00000584400 HAMPP81172 84 aa17.65■□□□□ 0.42
SMARCD2-210ENST00000584400 COMMD7Q86VX2 200 aa17.65■□□□□ 0.42
SMARCD2-210ENST00000584400 LAMTOR2Q9Y2Q5 125 aa17.65■□□□□ 0.42
SMARCD2-210ENST00000584400 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 LINC00959A0A1B0GUT2 108 aa17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 SMR3BP02814 79 aaPredicted RBP17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 Q5VSD8 79 aa17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 C9orf163Q8N9P6 203 aa17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 PRELID3AQ96N28 172 aa17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 UBE2D4Q9Y2X8 147 aa17.64■□□□□ 0.41
SMARCD2-210ENST00000584400 CNBPP62633 177 aaKnown RBP17.63■□□□□ 0.41
SMARCD2-210ENST00000584400 TIMM21Q9BVV7 248 aa17.63■□□□□ 0.41
SMARCD2-210ENST00000584400 CCL25O15444 150 aa17.62■□□□□ 0.41
SMARCD2-210ENST00000584400 RAB5AP20339 215 aa17.61■□□□□ 0.41
SMARCD2-210ENST00000584400 XCL1P47992 114 aa17.61■□□□□ 0.41
SMARCD2-210ENST00000584400 CHAC1Q9BUX1 264 aa17.6■□□□□ 0.41
SMARCD2-210ENST00000584400 FOXI1Q12951 378 aa17.59■□□□□ 0.41
SMARCD2-210ENST00000584400 TRAV9-1A0A075B6T8 112 aa17.58■□□□□ 0.4
SMARCD2-210ENST00000584400 C1orf196B1AJZ1 125 aa17.58■□□□□ 0.4
SMARCD2-210ENST00000584400 CD164L2Q6UWJ8 174 aa17.58■□□□□ 0.4
SMARCD2-210ENST00000584400 MAP1LC3AQ9H492 121 aa17.58■□□□□ 0.4
SMARCD2-210ENST00000584400 S100PP25815 95 aa17.57■□□□□ 0.4
SMARCD2-210ENST00000584400 SCXQ7RTU7 201 aa17.57■□□□□ 0.4
SMARCD2-210ENST00000584400 C15orf56Q8N910 161 aa17.57■□□□□ 0.4
SMARCD2-210ENST00000584400 SPANXA1Q9NS26 97 aa17.57■□□□□ 0.4
SMARCD2-210ENST00000584400 PRSS47A8MTI9 375 aa17.56■□□□□ 0.4
SMARCD2-210ENST00000584400 IGHV3-64A0A075B6Q5 118 aa17.54■□□□□ 0.4
SMARCD2-210ENST00000584400 GVQW2A0A096LPI5 108 aaPredicted RBP17.54■□□□□ 0.4
SMARCD2-210ENST00000584400 PCLOQ9Y6V0 5065 aa17.54■□□□□ 0.4
SMARCD2-210ENST00000584400 IGHV1-58A0A0C4DH39 117 aa17.53■□□□□ 0.4
SMARCD2-210ENST00000584400 LOC389332A0A1B0GUA5 103 aa17.52■□□□□ 0.4
SMARCD2-210ENST00000584400 RPL39P62891 51 aaKnown RBP17.52■□□□□ 0.4
SMARCD2-210ENST00000584400 HIGD2BQ4VC39 106 aa17.52■□□□□ 0.4
SMARCD2-210ENST00000584400 Q6ZUT4 128 aa17.52■□□□□ 0.4
SMARCD2-210ENST00000584400 CIRBP-AS1Q8TBR5 109 aa17.52■□□□□ 0.4
SMARCD2-210ENST00000584400 TRAV13-1A0A0B4J241 112 aa17.51■□□□□ 0.39
SMARCD2-210ENST00000584400 C10orf91Q5T1B1 145 aa17.51■□□□□ 0.39
SMARCD2-210ENST00000584400 SDIM1Q6ZPB5 146 aa17.51■□□□□ 0.39
SMARCD2-210ENST00000584400 SLPIP03973 132 aa17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 PLA2G1BP04054 148 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 INAFM2P0DMQ5 153 aa17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 IFI27P40305 119 aaPredicted RBP17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 MRPS36P82909 103 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 RNASE13Q5GAN3 156 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 CARHSP1Q9Y2V2 147 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-210ENST00000584400 K7EMI3 77 aa17.49■□□□□ 0.39
SMARCD2-210ENST00000584400 MALP21145 153 aa17.49■□□□□ 0.39
SMARCD2-210ENST00000584400 RHEBQ15382 184 aa17.49■□□□□ 0.39
SMARCD2-210ENST00000584400 LINC00528Q8N1L1 170 aa17.49■□□□□ 0.39
SMARCD2-210ENST00000584400 Q8N8P6 123 aa17.49■□□□□ 0.39
SMARCD2-210ENST00000584400 COX7A2LO14548 114 aa17.48■□□□□ 0.39
SMARCD2-210ENST00000584400 ZNF561-AS1K7EIQ3 104 aa17.47■□□□□ 0.39
SMARCD2-210ENST00000584400 COX19Q49B96 90 aa17.47■□□□□ 0.39
SMARCD2-210ENST00000584400 ORMDL2Q53FV1 153 aa17.46■□□□□ 0.39
SMARCD2-210ENST00000584400 NXT2Q9NPJ8 142 aaKnown RBP17.46■□□□□ 0.39
SMARCD2-210ENST00000584400 PKIGQ9Y2B9 76 aa17.46■□□□□ 0.39
SMARCD2-210ENST00000584400 PYGO1Q9Y3Y4 419 aa17.46■□□□□ 0.39
SMARCD2-210ENST00000584400 GNB1LQ9BYB4 327 aa17.45■□□□□ 0.38
SMARCD2-210ENST00000584400 RPS10P5Q9NQ39 176 aa17.45■□□□□ 0.38
SMARCD2-210ENST00000584400 G0S2P27469 103 aa17.44■□□□□ 0.38
SMARCD2-210ENST00000584400 DNAH8Q96JB1 4490 aa17.44■□□□□ 0.38
SMARCD2-210ENST00000584400 APOMO95445 188 aa17.43■□□□□ 0.38
SMARCD2-210ENST00000584400 DPH3Q96FX2 82 aa17.43■□□□□ 0.38
SMARCD2-210ENST00000584400 CYSLTR1Q9Y271 337 aa17.43■□□□□ 0.38
SMARCD2-210ENST00000584400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.43■□□□□ 0.38
SMARCD2-210ENST00000584400 ABCA13Q86UQ4 5058 aa17.43■□□□□ 0.38
SMARCD2-210ENST00000584400 IFITM10A6NMD0 228 aa17.42■□□□□ 0.38
SMARCD2-210ENST00000584400 NDUFA5Q16718 116 aa17.42■□□□□ 0.38
SMARCD2-210ENST00000584400 OPRPNQ99935 248 aaPredicted RBP17.41■□□□□ 0.38
SMARCD2-210ENST00000584400 MT-ND6P03923 174 aa17.4■□□□□ 0.38
SMARCD2-210ENST00000584400 CIRBPQ14011 172 aaKnown RBP17.4■□□□□ 0.38
SMARCD2-210ENST00000584400 C2orf66Q6UXQ4 117 aa17.39■□□□□ 0.37
SMARCD2-210ENST00000584400 FAM104AQ969W3 186 aa17.39■□□□□ 0.37
SMARCD2-210ENST00000584400 TMEM141Q96I45 108 aa17.39■□□□□ 0.37
SMARCD2-210ENST00000584400 FAT1Q14517 4588 aa17.39■□□□□ 0.37
SMARCD2-210ENST00000584400 COX6A2Q02221 97 aa17.38■□□□□ 0.37
SMARCD2-210ENST00000584400 KIAA1644Q3SXP7 199 aa17.38■□□□□ 0.37
SMARCD2-210ENST00000584400 Q6ZN92 141 aa17.38■□□□□ 0.37
SMARCD2-210ENST00000584400 C5orf38Q86SI9 138 aa17.38■□□□□ 0.37
SMARCD2-210ENST00000584400 CARD19Q96LW7 228 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms