RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C2orf16Q68DN1 1984 aa7.99□□□□□ -1.13
SEC22B-201ENST00000578049 M0QXV9 152 aa7.98□□□□□ -1.13
SEC22B-201ENST00000578049 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
SEC22B-201ENST00000578049 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
SEC22B-201ENST00000578049 PLA2G5P39877 138 aa7.98□□□□□ -1.13
SEC22B-201ENST00000578049 B9D2Q9BPU9 175 aa7.98□□□□□ -1.13
SEC22B-201ENST00000578049 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
SEC22B-201ENST00000578049 DEFB135Q30KP9 77 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 COX17Q14061 63 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 KIAA1549LQ6ZVL6 1849 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 UBE2D3P61077 147 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 UBE2D2P62837 147 aa7.97□□□□□ -1.13
SEC22B-201ENST00000578049 C6orf99Q4VX62 202 aa7.96□□□□□ -1.13
SEC22B-201ENST00000578049 MYO9AB2RTY4 2548 aa7.96□□□□□ -1.13
SEC22B-201ENST00000578049 CRYGDP07320 174 aa7.96□□□□□ -1.13
SEC22B-201ENST00000578049 Q6YL49 198 aa7.96□□□□□ -1.13
SEC22B-201ENST00000578049 C10orf142B7Z368 130 aa7.96□□□□□ -1.14
SEC22B-201ENST00000578049 KIR2DL5BQ8NHK3 375 aa7.96□□□□□ -1.14
SEC22B-201ENST00000578049 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
SEC22B-201ENST00000578049 KIF26AQ9ULI4 1882 aaPredicted RBP7.96□□□□□ -1.14
SEC22B-201ENST00000578049 CD164L2Q6UWJ8 174 aa7.96□□□□□ -1.14
SEC22B-201ENST00000578049 C11orf21Q9P2W6 132 aa7.96□□□□□ -1.14
SEC22B-201ENST00000578049 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 SEC61GP60059 68 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 TECTAO75443 2155 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 PCNX3Q9H6A9 2034 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 PTPN13Q12923 2485 aa7.95□□□□□ -1.14
SEC22B-201ENST00000578049 NAV2Q8IVL1 2488 aa7.94□□□□□ -1.14
SEC22B-201ENST00000578049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.94□□□□□ -1.14
SEC22B-201ENST00000578049 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
SEC22B-201ENST00000578049 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
SEC22B-201ENST00000578049 H0Y9J4 135 aa7.94□□□□□ -1.14
SEC22B-201ENST00000578049 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
SEC22B-201ENST00000578049 CCKP06307 115 aa7.94□□□□□ -1.14
SEC22B-201ENST00000578049 MIFP14174 115 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 C11orf71Q6IPW1 123 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 PRORYQ9H606 182 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 ESM1Q9NQ30 184 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 HCFC1P51610 2035 aa7.93□□□□□ -1.14
SEC22B-201ENST00000578049 WISP2O76076 250 aa7.92□□□□□ -1.14
SEC22B-201ENST00000578049 BRI3O95415 125 aa7.92□□□□□ -1.14
SEC22B-201ENST00000578049 Q6ZS46 218 aa7.92□□□□□ -1.14
SEC22B-201ENST00000578049 Q8IZM0 81 aa7.92□□□□□ -1.14
SEC22B-201ENST00000578049 M0R378 163 aa7.92□□□□□ -1.14
SEC22B-201ENST00000578049 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
SEC22B-201ENST00000578049 TRAV7A0A075B6U4 112 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 DNAJC9-AS1A6NH13 148 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 PRB1P04280 392 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 Q6ZQY7 126 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 CLUHP3Q96NS8 147 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 IGLV1-40P01703 118 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 SLPIP03973 132 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 PRR9Q5T870 116 aa7.91□□□□□ -1.14
SEC22B-201ENST00000578049 SYCNQ0VAF6 134 aa7.9□□□□□ -1.14
SEC22B-201ENST00000578049 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
SEC22B-201ENST00000578049 CRIP2P52943 208 aaPredicted RBP7.9□□□□□ -1.14
SEC22B-201ENST00000578049 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
SEC22B-201ENST00000578049 IL17DQ8TAD2 202 aa7.9□□□□□ -1.15
SEC22B-201ENST00000578049 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.15
SEC22B-201ENST00000578049 ZNF580Q9UK33 172 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 NUP210LQ5VU65 1888 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 C22orf34Q6ZV56 151 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 DCANP1Q8TF63 244 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 CSDC2Q9Y534 153 aaKnown RBP7.89□□□□□ -1.15
SEC22B-201ENST00000578049 IGKV4-1P06312 121 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 CDC42SE2Q9NRR3 84 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 OTOGLQ3ZCN5 2332 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 HIGD2AQ9BW72 106 aa7.89□□□□□ -1.15
SEC22B-201ENST00000578049 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 PCDH15Q96QU1 1955 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 MPLKIPQ8TAP9 179 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 NTM-AS1Q6ZSK4 140 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 POM121L12Q8N7R1 296 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 KIAA1549Q9HCM3 1950 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
SEC22B-201ENST00000578049 IGLV4-69A0A075B6H9 119 aa7.87□□□□□ -1.15
SEC22B-201ENST00000578049 A0A096LNJ9 63 aa7.87□□□□□ -1.15
SEC22B-201ENST00000578049 C11orf45Q8TAV5 145 aa7.87□□□□□ -1.15
SEC22B-201ENST00000578049 LINC00242Q5T6M2 205 aa7.87□□□□□ -1.15
SEC22B-201ENST00000578049 LELP1Q5T871 98 aa7.87□□□□□ -1.15
SEC22B-201ENST00000578049 GAS8-AS1O95177 125 aa7.86□□□□□ -1.15
SEC22B-201ENST00000578049 ATG2AQ2TAZ0 1938 aa7.86□□□□□ -1.15
SEC22B-201ENST00000578049 PRB2P02812 416 aaPredicted RBP7.86□□□□□ -1.15
SEC22B-201ENST00000578049 AMELXQ99217 191 aa7.86□□□□□ -1.15
SEC22B-201ENST00000578049 ZNF73O43830 326 aaPredicted RBP7.86□□□□□ -1.15
SEC22B-201ENST00000578049 IGHV4-31P0DP07 118 aa7.85□□□□□ -1.15
SEC22B-201ENST00000578049 DEFB4AO15263 64 aa7.85□□□□□ -1.15
SEC22B-201ENST00000578049 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
SEC22B-201ENST00000578049 XAGE1AQ9HD64 81 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms