RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 MALP21145 153 aa12.12□□□□□ -0.47
LITAF-209ENST00000571688 FAM19A3Q7Z5A8 133 aa12.11□□□□□ -0.47
LITAF-209ENST00000571688 K7ENP7 123 aa12.11□□□□□ -0.47
LITAF-209ENST00000571688 ZNF415Q09FC8 603 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 hADV29S1A0JD25 119 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 PSMB8P28062 276 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 HIST2H2BDQ6DRA6 164 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 PRIMA1Q86XR5 153 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 Q9HAA7 133 aa12.1□□□□□ -0.47
LITAF-209ENST00000571688 PRM2P04554 102 aa12.09□□□□□ -0.47
LITAF-209ENST00000571688 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
LITAF-209ENST00000571688 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
LITAF-209ENST00000571688 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
LITAF-209ENST00000571688 SORL1Q92673 2214 aa12.09□□□□□ -0.47
LITAF-209ENST00000571688 ATP5J2P56134 94 aa12.08□□□□□ -0.47
LITAF-209ENST00000571688 PF4P02776 101 aa12.07□□□□□ -0.48
LITAF-209ENST00000571688 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
LITAF-209ENST00000571688 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
LITAF-209ENST00000571688 TRAV13-2A0A0B4J235 113 aa12.06□□□□□ -0.48
LITAF-209ENST00000571688 A8MTW9 85 aa12.06□□□□□ -0.48
LITAF-209ENST00000571688 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
LITAF-209ENST00000571688 Q6JHZ5 121 aa12.06□□□□□ -0.48
LITAF-209ENST00000571688 F5H768 121 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 DNAL4O96015 105 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 HOXD3P31249 432 aaPredicted RBP12.05□□□□□ -0.48
LITAF-209ENST00000571688 PIMREGQ9BSJ6 248 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 SYNJ2BPP57105 145 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
LITAF-209ENST00000571688 C9orf129Q5T035 196 aaKnown RBP12.04□□□□□ -0.48
LITAF-209ENST00000571688 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
LITAF-209ENST00000571688 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
LITAF-209ENST00000571688 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
LITAF-209ENST00000571688 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
LITAF-209ENST00000571688 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
LITAF-209ENST00000571688 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
LITAF-209ENST00000571688 TMEM258P61165 79 aa12.04□□□□□ -0.48
LITAF-209ENST00000571688 OBSCN-AS1Q96MR7 158 aa12.04□□□□□ -0.48
LITAF-209ENST00000571688 CRPP02741 224 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 KLRB1Q12918 225 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 RS1O15537 224 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 LINC00337Q8N6G1 96 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 SERP2Q8N6R1 65 aa12.03□□□□□ -0.48
LITAF-209ENST00000571688 NBASA2RRP1 2371 aa12.02□□□□□ -0.48
LITAF-209ENST00000571688 C14orf132Q9NPU4 83 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 SPTA1P02549 2419 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 A0A087WYN8 130 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 IGKV3D-7A0A0C4DH55 119 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 DPH3Q96FX2 82 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
LITAF-209ENST00000571688 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 AKAP6Q13023 2319 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 IGKV2-28A0A075B6P5 120 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 TMEM89A2RUT3 159 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 IGKV2D-28P01615 120 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 DEFB131AP59861 70 aa12.01□□□□□ -0.49
LITAF-209ENST00000571688 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
LITAF-209ENST00000571688 KIR2DL5BQ8NHK3 375 aa12□□□□□ -0.49
LITAF-209ENST00000571688 TTC28Q96AY4 2481 aa12□□□□□ -0.49
LITAF-209ENST00000571688 LINC01561Q8N1V8 128 aa11.99□□□□□ -0.49
LITAF-209ENST00000571688 Q96MF0 132 aa11.99□□□□□ -0.49
LITAF-209ENST00000571688 A0A087WVE0 104 aa11.98□□□□□ -0.49
LITAF-209ENST00000571688 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
LITAF-209ENST00000571688 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
LITAF-209ENST00000571688 WIPF1O43516 503 aa11.97□□□□□ -0.49
LITAF-209ENST00000571688 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
LITAF-209ENST00000571688 SND1-IT1Q9HBX3 110 aa11.97□□□□□ -0.49
LITAF-209ENST00000571688 H0YGX0 51 aa11.97□□□□□ -0.49
LITAF-209ENST00000571688 USP17L23D6RBM5 183 aa11.96□□□□□ -0.49
LITAF-209ENST00000571688 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
LITAF-209ENST00000571688 OXTP01178 125 aa11.96□□□□□ -0.5
LITAF-209ENST00000571688 COL12A1Q99715 3063 aa11.95□□□□□ -0.5
LITAF-209ENST00000571688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■□□□ 13.8
LITAF-209ENST00000571688 DSCR8Q96T75 97 aa11.93□□□□□ -0.5
LITAF-209ENST00000571688 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
LITAF-209ENST00000571688 NCR3O14931 201 aa11.92□□□□□ -0.5
LITAF-209ENST00000571688 LECT2O14960 151 aa11.92□□□□□ -0.5
LITAF-209ENST00000571688 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
LITAF-209ENST00000571688 AVPP01185 164 aa11.91□□□□□ -0.5
LITAF-209ENST00000571688 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
LITAF-209ENST00000571688 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
LITAF-209ENST00000571688 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
LITAF-209ENST00000571688 CRYBG3Q68DQ2 2970 aa11.91□□□□□ -0.5
LITAF-209ENST00000571688 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
LITAF-209ENST00000571688 CCL18P55774 89 aa11.91□□□□□ -0.5
LITAF-209ENST00000571688 INSP01308 110 aa11.9□□□□□ -0.5
LITAF-209ENST00000571688 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
LITAF-209ENST00000571688 MSMBP08118 114 aa11.9□□□□□ -0.5
LITAF-209ENST00000571688 K7EQD1 137 aa11.9□□□□□ -0.51
LITAF-209ENST00000571688 SS18Q15532 418 aa11.89□□□□□ -0.51
LITAF-209ENST00000571688 CEP295Q9C0D2 2601 aa11.89□□□□□ -0.51
LITAF-209ENST00000571688 HIVEP3Q5T1R4 2406 aa11.89□□□□□ -0.51
LITAF-209ENST00000571688 LINC00158P58513 81 aa11.88□□□□□ -0.51
LITAF-209ENST00000571688 IL17DQ8TAD2 202 aa11.88□□□□□ -0.51
LITAF-209ENST00000571688 UBE2E2Q96LR5 201 aa11.88□□□□□ -0.51
LITAF-209ENST00000571688 MAP6D1Q9H9H5 199 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms