RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 BEAN1Q3B7T3 259 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 EEF1AKMT3Q96AZ1 226 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 EDA2RQ9HAV5 297 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 RETNQ9HD89 108 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 C22orf24Q9Y442 160 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 PTPN13Q12923 2485 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 DOPEY2Q9Y3R5 2298 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 NPFFO15130 113 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 RS1O15537 224 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 COX6CP09669 75 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 KRTAP1-1Q07627 177 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 C9orf85Q96MD7 179 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 ZNF580Q9UK33 172 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 AKAP6Q13023 2319 aa4□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 HERVK_113P63121 156 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 CLEC19AQ6UXS0 136 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 STHQ8IWL8 128 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 OPRPNQ99935 248 aaPredicted RBP3.99□□□□□ -1.77
LINC01541-202ENST00000568095 TEX15Q9BXT5 2789 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 J3KT08 172 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 MSMBP08118 114 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV4-31P0DP07 118 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 COX7CP15954 63 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 IL17DQ8TAD2 202 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
LINC01541-202ENST00000568095 POLQO75417 2590 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 ABCA12Q86UK0 2595 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 ATP6V0E1O15342 81 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 C9orf153Q5TBE3 101 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 JPT2Q9H910 190 aa3.99□□□□□ -1.77
LINC01541-202ENST00000568095 PRYO14603 147 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 SAA4P35542 130 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 TMEM219Q86XT9 240 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 C3orf56Q8N813 242 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 DAND5Q8N907 189 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 VSIG2Q96IQ7 327 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 TIMM21Q9BVV7 248 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 ABCA1O95477 2261 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3OR16-13A0A075B7E8 117 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3-74A0A0B4J1X5 117 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 LOC107984640A0A0U1RRK4 108 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 Q6ZSV7 163 aa3.98□□□□□ -1.77
LINC01541-202ENST00000568095 FAM19A5Q7Z5A7 132 aaPredicted RBP3.98□□□□□ -1.77
LINC01541-202ENST00000568095 TINCRA0A1B0GVN0 87 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 B4DSR2 109 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV4-38-2P0DP08 117 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 FAM222AQ5U5X8 452 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 DNAH3Q8TD57 4116 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3-49A0A0A0MS15 119 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3-16A0A0C4DH30 117 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 J3QLI3 93 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 COX7A2LO14548 114 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 LINC01356Q8N9X3 169 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 LINC00527Q9UJ94 153 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3-64A0A075B6Q5 118 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 NDUFA4O00483 81 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 TRACP01848 142 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 UPK3BQ9BT76 320 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 NDUFA12Q9UI09 145 aa3.97□□□□□ -1.77
LINC01541-202ENST00000568095 ANK2Q01484 3957 aa3.96□□□□□ -1.77
LINC01541-202ENST00000568095 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 G3V318 75 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 V9GYY9 64 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 WNK2Q9Y3S1 2297 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 SPG11Q96JI7 2443 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 TRAV8-3A0A0A6YYJ7 113 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 NDUFA1O15239 70 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 DEFB1P60022 68 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 UNQ9165/PRO28630Q6UXU0 137 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 C5orf56Q8N8D9 126 aa3.96□□□□□ -1.78
LINC01541-202ENST00000568095 A6NDX4 124 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 F6UB75 175 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 ATOX1O00244 68 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 LINC00482Q8N8I6 264 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 KLK5Q9Y337 293 aaPredicted RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 IGHG2P01859 326 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 CFHR3Q02985 330 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 DEFB104AQ8WTQ1 72 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 Q96MF0 132 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 FLNAP21333 2647 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 PRSS2P07478 247 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 TMEM258P61165 79 aa3.95□□□□□ -1.78
LINC01541-202ENST00000568095 DAZ2Q13117 558 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 DAZ4Q86SG3 579 aaKnown RBP3.95□□□□□ -1.78
LINC01541-202ENST00000568095 WFDC11Q8NEX6 87 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms