RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 C20orf78Q9BR46 151 aa16.37■□□□□ 0.21
FANCA-228ENST00000567943 TRBV24-1A0A075B6N3 115 aa16.36■□□□□ 0.21
FANCA-228ENST00000567943 TNFRSF6BO95407 300 aa16.36■□□□□ 0.21
FANCA-228ENST00000567943 OR5A1Q8NGJ0 315 aa16.36■□□□□ 0.21
FANCA-228ENST00000567943 GAGE12HA6NDE8 117 aa16.34■□□□□ 0.21
FANCA-228ENST00000567943 MRPL52Q86TS9 123 aaKnown RBP16.34■□□□□ 0.21
FANCA-228ENST00000567943 NPYP01303 97 aa16.33■□□□□ 0.2
FANCA-228ENST00000567943 PPBPP02775 128 aa16.33■□□□□ 0.2
FANCA-228ENST00000567943 COMMD7Q86VX2 200 aa16.33■□□□□ 0.2
FANCA-228ENST00000567943 CHCHD10Q8WYQ3 142 aaPredicted RBP16.33■□□□□ 0.2
FANCA-228ENST00000567943 RPL32P62910 135 aaKnown RBP16.32■□□□□ 0.2
FANCA-228ENST00000567943 CLRN3Q8NCR9 226 aa16.32■□□□□ 0.2
FANCA-228ENST00000567943 INAFM2P0DMQ5 153 aa16.31■□□□□ 0.2
FANCA-228ENST00000567943 ORMDL3Q8N138 153 aa16.31■□□□□ 0.2
FANCA-228ENST00000567943 SMIM2Q9BVW6 85 aa16.31■□□□□ 0.2
FANCA-228ENST00000567943 CDC42SE2Q9NRR3 84 aa16.31■□□□□ 0.2
FANCA-228ENST00000567943 PHOX2AO14813 284 aa16.3■□□□□ 0.2
FANCA-228ENST00000567943 DGAT2L7PQ6IED9 249 aa16.3■□□□□ 0.2
FANCA-228ENST00000567943 TMEM136Q6ZRR5 245 aa16.3■□□□□ 0.2
FANCA-228ENST00000567943 FLG2Q5D862 2391 aaPredicted RBP16.3■□□□□ 0.2
FANCA-228ENST00000567943 HERC1Q15751 4861 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 hDV102S1A0JD36 115 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 FAM229AH3BQW9 127 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 SCXQ7RTU7 201 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 ZNF664Q8N3J9 261 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 PRELID3AQ96N28 172 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 SEC11CQ9BY50 192 aa16.29■□□□□ 0.2
FANCA-228ENST00000567943 LINC00959A0A1B0GUT2 108 aa16.28■□□□□ 0.2
FANCA-228ENST00000567943 UBE2D4Q9Y2X8 147 aa16.28■□□□□ 0.2
FANCA-228ENST00000567943 TCAPO15273 167 aa16.27■□□□□ 0.2
FANCA-228ENST00000567943 SMAGPQ0VAQ4 97 aa16.27■□□□□ 0.2
FANCA-228ENST00000567943 XCL1P47992 114 aa16.26■□□□□ 0.19
FANCA-228ENST00000567943 TMEM18Q96B42 140 aa16.26■□□□□ 0.19
FANCA-228ENST00000567943 IMMP2LQ96T52 175 aa16.26■□□□□ 0.19
FANCA-228ENST00000567943 CHAC1Q9BUX1 264 aa16.26■□□□□ 0.19
FANCA-228ENST00000567943 CTDSP1Q9GZU7 261 aa16.26■□□□□ 0.19
FANCA-228ENST00000567943 C15orf56Q8N910 161 aa16.25■□□□□ 0.19
FANCA-228ENST00000567943 C9orf163Q8N9P6 203 aa16.25■□□□□ 0.19
FANCA-228ENST00000567943 CSDC2Q9Y534 153 aaKnown RBP16.25■□□□□ 0.19
FANCA-228ENST00000567943 CCL25O15444 150 aa16.24■□□□□ 0.19
FANCA-228ENST00000567943 FOXI1Q12951 378 aa16.24■□□□□ 0.19
FANCA-228ENST00000567943 SS18Q15532 418 aa16.24■□□□□ 0.19
FANCA-228ENST00000567943 CFAP161Q6P656 301 aa16.24■□□□□ 0.19
FANCA-228ENST00000567943 AP5S1Q9NUS5 200 aa16.24■□□□□ 0.19
FANCA-228ENST00000567943 RNASE13Q5GAN3 156 aaKnown RBP16.23■□□□□ 0.19
FANCA-228ENST00000567943 CNBPP62633 177 aaKnown RBP16.22■□□□□ 0.19
FANCA-228ENST00000567943 RPL39P62891 51 aaKnown RBP16.22■□□□□ 0.19
FANCA-228ENST00000567943 LINC00528Q8N1L1 170 aa16.22■□□□□ 0.19
FANCA-228ENST00000567943 CIRBP-AS1Q8TBR5 109 aa16.22■□□□□ 0.19
FANCA-228ENST00000567943 TIMM21Q9BVV7 248 aa16.22■□□□□ 0.19
FANCA-228ENST00000567943 HIGD2BQ4VC39 106 aa16.21■□□□□ 0.19
FANCA-228ENST00000567943 Q6ZUT4 128 aa16.21■□□□□ 0.19
FANCA-228ENST00000567943 LAMTOR2Q9Y2Q5 125 aa16.21■□□□□ 0.19
FANCA-228ENST00000567943 LOC389332A0A1B0GUA5 103 aa16.2■□□□□ 0.18
FANCA-228ENST00000567943 SLPIP03973 132 aa16.2■□□□□ 0.18
FANCA-228ENST00000567943 RAB5AP20339 215 aa16.19■□□□□ 0.18
FANCA-228ENST00000567943 MAP1LC3AQ9H492 121 aa16.19■□□□□ 0.18
FANCA-228ENST00000567943 PKHD1L1Q86WI1 4243 aa16.18■□□□□ 0.18
FANCA-228ENST00000567943 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.18■□□□□ 0.18
FANCA-228ENST00000567943 C10orf91Q5T1B1 145 aa16.18■□□□□ 0.18
FANCA-228ENST00000567943 CD164L2Q6UWJ8 174 aa16.18■□□□□ 0.18
FANCA-228ENST00000567943 DMBT1Q9UGM3 2413 aaPredicted RBP16.17■□□□□ 0.18
FANCA-228ENST00000567943 TRAV9-1A0A075B6T8 112 aa16.17■□□□□ 0.18
FANCA-228ENST00000567943 PRSS47A8MTI9 375 aa16.17■□□□□ 0.18
FANCA-228ENST00000567943 GVQW2A0A096LPI5 108 aaPredicted RBP16.16■□□□□ 0.18
FANCA-228ENST00000567943 TRAV13-1A0A0B4J241 112 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 C1orf196B1AJZ1 125 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 PANO1I0J062 215 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 S100PP25815 95 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 SDIM1Q6ZPB5 146 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 SPANXA1Q9NS26 97 aa16.16■□□□□ 0.18
FANCA-228ENST00000567943 CARHSP1Q9Y2V2 147 aaKnown RBP16.16■□□□□ 0.18
FANCA-228ENST00000567943 KRTAP10-4P60372 401 aaPredicted RBP16.15■□□□□ 0.18
FANCA-228ENST00000567943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.15■□□□□ 0.18
FANCA-228ENST00000567943 OPRPNQ99935 248 aaPredicted RBP16.14■□□□□ 0.17
FANCA-228ENST00000567943 IGHV3-64A0A075B6Q5 118 aa16.13■□□□□ 0.17
FANCA-228ENST00000567943 IGHV1-58A0A0C4DH39 117 aa16.13■□□□□ 0.17
FANCA-228ENST00000567943 PLA2G1BP04054 148 aaKnown RBP16.13■□□□□ 0.17
FANCA-228ENST00000567943 Q8N8P6 123 aa16.13■□□□□ 0.17
FANCA-228ENST00000567943 FAM104AQ969W3 186 aa16.13■□□□□ 0.17
FANCA-228ENST00000567943 RPS10P5Q9NQ39 176 aa16.12■□□□□ 0.17
FANCA-228ENST00000567943 MRPS36P82909 103 aaKnown RBP16.11■□□□□ 0.17
FANCA-228ENST00000567943 RHEBQ15382 184 aa16.11■□□□□ 0.17
FANCA-228ENST00000567943 KIAA1644Q3SXP7 199 aa16.11■□□□□ 0.17
FANCA-228ENST00000567943 LRP1Q07954 4544 aaKnown RBP16.09■□□□□ 0.17
FANCA-228ENST00000567943 COX7A2LO14548 114 aa16.09■□□□□ 0.17
FANCA-228ENST00000567943 IFI27P40305 119 aaPredicted RBP16.09■□□□□ 0.17
FANCA-228ENST00000567943 LINC00526Q96FQ7 95 aa16.09■□□□□ 0.17
FANCA-228ENST00000567943 MALP21145 153 aa16.08■□□□□ 0.16
FANCA-228ENST00000567943 C5orf38Q86SI9 138 aa16.07■□□□□ 0.16
FANCA-228ENST00000567943 GNB1LQ9BYB4 327 aa16.07■□□□□ 0.16
FANCA-228ENST00000567943 PYGO1Q9Y3Y4 419 aa16.07■□□□□ 0.16
FANCA-228ENST00000567943 FAT3Q8TDW7 4589 aa16.06■□□□□ 0.16
FANCA-228ENST00000567943 IFITM10A6NMD0 228 aa16.06■□□□□ 0.16
FANCA-228ENST00000567943 CIRBPQ14011 172 aaKnown RBP16.06■□□□□ 0.16
FANCA-228ENST00000567943 ORMDL2Q53FV1 153 aa16.06■□□□□ 0.16
FANCA-228ENST00000567943 NXT2Q9NPJ8 142 aaKnown RBP16.06■□□□□ 0.16
FANCA-228ENST00000567943 ZNF561-AS1K7EIQ3 104 aa16.05■□□□□ 0.16
FANCA-228ENST00000567943 CHTF8P0CG12 524 aa16.05■□□□□ 0.16
FANCA-228ENST00000567943 C2orf66Q6UXQ4 117 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms