RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 SPG11Q96JI7 2443 aa7.98□□□□□ -1.13
TCF4-232ENST00000566286 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
TCF4-232ENST00000566286 UBE2D4Q9Y2X8 147 aa7.98□□□□□ -1.13
TCF4-232ENST00000566286 MSMBP08118 114 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
TCF4-232ENST00000566286 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
TCF4-232ENST00000566286 ZNF843Q8N446 348 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 DOPEY2Q9Y3R5 2298 aa7.97□□□□□ -1.13
TCF4-232ENST00000566286 NDUFA1O15239 70 aa7.96□□□□□ -1.13
TCF4-232ENST00000566286 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.13
TCF4-232ENST00000566286 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.13
TCF4-232ENST00000566286 IGHV4-30-2A0A087WSY4 118 aa7.96□□□□□ -1.14
TCF4-232ENST00000566286 SYNJ2BPP57105 145 aa7.96□□□□□ -1.14
TCF4-232ENST00000566286 NPC2P61916 151 aa7.96□□□□□ -1.14
TCF4-232ENST00000566286 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
TCF4-232ENST00000566286 UTP20O75691 2785 aaKnown RBP7.95□□□□□ -1.14
TCF4-232ENST00000566286 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
TCF4-232ENST00000566286 CCDC179H3BU77 68 aa7.95□□□□□ -1.14
TCF4-232ENST00000566286 RBMY1A1P0DJD3 496 aaKnown RBP7.95□□□□□ -1.14
TCF4-232ENST00000566286 RBMY1CP0DJD4 496 aa7.95□□□□□ -1.14
TCF4-232ENST00000566286 PROK1P58294 105 aa7.95□□□□□ -1.14
TCF4-232ENST00000566286 RBMY1FQ15415 496 aaKnown RBP7.95□□□□□ -1.14
TCF4-232ENST00000566286 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
TCF4-232ENST00000566286 A8MTW9 85 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 ACYP1P07311 99 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 HTN1P15515 57 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 DUX3Q96PT4 197 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 UBR5O95071 2799 aaPredicted RBP7.94□□□□□ -1.14
TCF4-232ENST00000566286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
TCF4-232ENST00000566286 TRBV7-7A0A0K0K1E9 115 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
TCF4-232ENST00000566286 Q6ZSV7 163 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 FAM208BQ5VWN6 2430 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 EPG5Q9HCE0 2579 aa7.94□□□□□ -1.14
TCF4-232ENST00000566286 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 CRYBG3Q68DQ2 2970 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 B4DSR2 109 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 LINC00467Q9BRT7 94 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 LRRK2Q5S007 2527 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 IGHV3-53P01767 116 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 HOXD3P31249 432 aaPredicted RBP7.93□□□□□ -1.14
TCF4-232ENST00000566286 C10orf99Q6UWK7 81 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 TMEM101Q96IK0 257 aa7.93□□□□□ -1.14
TCF4-232ENST00000566286 IGHV4-59P01825 116 aa7.92□□□□□ -1.14
TCF4-232ENST00000566286 HERVK_113P63121 156 aa7.92□□□□□ -1.14
TCF4-232ENST00000566286 COX7A2LO14548 114 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 Q6ZSN1 163 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 LINC00308Q8TCZ7 52 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 UBE2E2Q96LR5 201 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 IMUPQ9GZP8 106 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 CELSR2Q9HCU4 2923 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 DEFB131AP59861 70 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 DAND5Q8N907 189 aa7.91□□□□□ -1.14
TCF4-232ENST00000566286 DSCR9P59020 149 aa7.9□□□□□ -1.14
TCF4-232ENST00000566286 DEFB112Q30KQ8 113 aa7.9□□□□□ -1.14
TCF4-232ENST00000566286 Q75L30 129 aa7.9□□□□□ -1.14
TCF4-232ENST00000566286 Q9UF83 564 aa7.9□□□□□ -1.14
TCF4-232ENST00000566286 SORL1Q92673 2214 aa7.9□□□□□ -1.14
TCF4-232ENST00000566286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.9□□□□□ -1.14
TCF4-232ENST00000566286 BEAN1Q3B7T3 259 aa7.9□□□□□ -1.15
TCF4-232ENST00000566286 FBN2P35556 2912 aa7.9□□□□□ -1.15
TCF4-232ENST00000566286 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
TCF4-232ENST00000566286 FAM19A3Q7Z5A8 133 aa7.89□□□□□ -1.15
TCF4-232ENST00000566286 ANKRD17O75179 2603 aaKnown RBP7.89□□□□□ -1.15
TCF4-232ENST00000566286 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
TCF4-232ENST00000566286 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
TCF4-232ENST00000566286 TRACP01848 142 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
TCF4-232ENST00000566286 MEIG1Q5JSS6 88 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 C11orf72Q8NBR9 251 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 MAP1AP78559 2803 aaPredicted RBP7.88□□□□□ -1.15
TCF4-232ENST00000566286 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.88□□□□□ -1.15
TCF4-232ENST00000566286 LINC01587Q99440 93 aa7.88□□□□□ -1.15
TCF4-232ENST00000566286 A0A096LNT2 108 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 LINC00242Q5T6M2 205 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 POLQO75417 2590 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 INSP01308 110 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 COX6A2Q02221 97 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
TCF4-232ENST00000566286 PTPN13Q12923 2485 aa7.86□□□□□ -1.15
TCF4-232ENST00000566286 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
TCF4-232ENST00000566286 PRM2P04554 102 aa7.86□□□□□ -1.15
TCF4-232ENST00000566286 CHCHD5Q9BSY4 110 aa7.86□□□□□ -1.15
TCF4-232ENST00000566286 VPREB3Q9UKI3 123 aa7.86□□□□□ -1.15
TCF4-232ENST00000566286 USP9YO00507 2555 aaPredicted RBP7.85□□□□□ -1.15
TCF4-232ENST00000566286 KRTAP10-9P60411 292 aa7.85□□□□□ -1.15
TCF4-232ENST00000566286 PRIMA1Q86XR5 153 aa7.85□□□□□ -1.15
TCF4-232ENST00000566286 TMEM126AQ9H061 195 aa7.85□□□□□ -1.15
TCF4-232ENST00000566286 CSMD2Q7Z408 3487 aa7.85□□□□□ -1.15
TCF4-232ENST00000566286 CENPEQ02224 2701 aa7.85□□□□□ -1.15
TCF4-232ENST00000566286 J3QLI3 93 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms