RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CDIP1Q9H305 208 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 IGHV3-38A0A0C4DH36 116 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 LINC01549A6NIU2 74 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 PLNP26678 52 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 FOXI1Q12951 378 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 TMEM141Q96I45 108 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.33
LINC00838-201ENST00000562956 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.33
LINC00838-201ENST00000562956 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.34
LINC00838-201ENST00000562956 WIPF1O43516 503 aa6.71□□□□□ -1.34
LINC00838-201ENST00000562956 DNAJC30Q96LL9 226 aa6.71□□□□□ -1.34
LINC00838-201ENST00000562956 PRO0461Q9UI25 63 aa6.71□□□□□ -1.34
LINC00838-201ENST00000562956 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 X6R8D5 127 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 Q6ZUT4 128 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 ZNRF2Q8NHG8 242 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 K7EQD1 137 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
LINC00838-201ENST00000562956 PMVKQ15126 192 aa6.7□□□□□ -1.34
LINC00838-201ENST00000562956 C3orf56Q8N813 242 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 IGLV4-69A0A075B6H9 119 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 TRBV7-3A0A075B6L6 115 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 OXLD1Q5BKU9 147 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 CEMP1Q6PRD7 247 aaPredicted RBP6.69□□□□□ -1.34
LINC00838-201ENST00000562956 SHISA2Q6UWI4 295 aa6.69□□□□□ -1.34
LINC00838-201ENST00000562956 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 FAM104AQ969W3 186 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 IGLV4-3A0A075B6K6 122 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
LINC00838-201ENST00000562956 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
LINC00838-201ENST00000562956 KIR2DL5BQ8NHK3 375 aa6.68□□□□□ -1.34
LINC00838-201ENST00000562956 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 C11orf86A6NJI1 115 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 APOC4P55056 127 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 GAGE12JA6NER3 117 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 RPL36AP83881 106 aaKnown RBP6.67□□□□□ -1.34
LINC00838-201ENST00000562956 GAGE4Q13068 117 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 GAGE5Q13069 117 aa6.67□□□□□ -1.34
LINC00838-201ENST00000562956 RPL36ALQ969Q0 106 aaKnown RBP6.67□□□□□ -1.34
LINC00838-201ENST00000562956 SMIM9A6NGZ8 99 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 KRTAP10-11P60412 298 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 UBE2D3P61077 147 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 UBE2D2P62837 147 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 FHL2Q14192 279 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 ERG28Q9UKR5 140 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 TRGV4A0A0C4DH28 118 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 TSPAN13O95857 204 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 TRBV6-4A0A1B0GX49 114 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 DEFB4AO15263 64 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 HERV-K104P63124 156 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC00838-201ENST00000562956 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
LINC00838-201ENST00000562956 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
LINC00838-201ENST00000562956 STAB1Q9NY15 2570 aa6.65□□□□□ -1.34
LINC00838-201ENST00000562956 NTM-AS1Q6ZSK4 140 aa6.65□□□□□ -1.34
LINC00838-201ENST00000562956 OR11H2Q8NH07 326 aa6.65□□□□□ -1.34
LINC00838-201ENST00000562956 VCX2Q9H322 139 aa6.65□□□□□ -1.34
LINC00838-201ENST00000562956 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.35
LINC00838-201ENST00000562956 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.35
LINC00838-201ENST00000562956 H7C2G1 150 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 FAM222AQ5U5X8 452 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 AMELXQ99217 191 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 CMYA5Q8N3K9 4069 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 GAGE6Q13070 117 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 PAPPA-AS1Q5QFB9 102 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
LINC00838-201ENST00000562956 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 A6NJY4 79 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 ZFAND6Q6FIF0 208 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 PRADC1Q9BSG0 188 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 MYMXA0A1B0GTQ4 84 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 Q8NAQ8 132 aa6.63□□□□□ -1.35
LINC00838-201ENST00000562956 TCL1BO95988 128 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 EGFEM1PQ0D2K5 195 aa6.62□□□□□ -1.35
LINC00838-201ENST00000562956 ANKRD29Q8N6D5 301 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms