RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 BCE1O60756 84 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 IGHV3-33P01772 117 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 UBE2D1P51668 147 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 CNBPP62633 177 aaKnown RBP1.49□□□□□ -2.17
CNOT1-203ENST00000562046 PDE6HQ13956 83 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 KRTAP21-3Q3LHN1 58 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 CSAG1Q6PB30 78 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 NDUFA11Q86Y39 141 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 Q8N6K4 173 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 PRO1854Q9UHT4 67 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 MED13Q9UHV7 2174 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 URB2Q14146 1524 aaKnown RBP1.49□□□□□ -2.17
CNOT1-203ENST00000562046 SIP14410 1827 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 ARFGEF1Q9Y6D6 1849 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 IQSEC2Q5JU85 1478 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 NRXN2Q9P2S2 1712 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 KIAA0100Q14667 2235 aaKnown RBP1.48□□□□□ -2.17
CNOT1-203ENST00000562046 PLXNC1O60486 1568 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 ARHGEF5Q12774 1597 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 TRBV10-1A0A0K0K1A3 114 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 ACYP1P07311 99 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 C1orf137Q5JT78 98 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 ZNF818PQ6ZRF7 136 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 LINC00643Q86TS7 51 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 NEXMIFQ5QGS0 1516 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 XRN1Q8IZH2 1706 aaKnown RBP1.48□□□□□ -2.17
CNOT1-203ENST00000562046 C1orf167Q5SNV9 1468 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 PRXQ9BXM0 1461 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 FANCD2Q9BXW9 1451 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 MED12Q93074 2177 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 MYOM1P52179 1685 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 CTTNBP2Q8WZ74 1663 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 SPTBP11277 2137 aa1.48□□□□□ -2.17
CNOT1-203ENST00000562046 BAZ2BQ9UIF8 2168 aaKnown RBP1.47□□□□□ -2.17
CNOT1-203ENST00000562046 A0A087WXM4 84 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 CLPSL1A2RUU4 121 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 UMAD1C9J7I0 102 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 ELOBQ15370 118 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 C10orf128Q5T292 105 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 TMEM170BQ5T4T1 132 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 SFTA2Q6UW10 78 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 SCN7AQ01118 1682 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 RNF17Q9BXT8 1623 aaKnown RBP1.47□□□□□ -2.17
CNOT1-203ENST00000562046 LOC285556D6RIA3 1793 aa1.47□□□□□ -2.17
CNOT1-203ENST00000562046 ANKRD36A6QL64 1941 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 ASXL1Q8IXJ9 1541 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 PLCH1Q4KWH8 1693 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 CFAP43Q8NDM7 1665 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 IGKV3-7A0A075B6H7 116 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 TRBV25-1A0A075B6N4 114 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 NUPR2A6NF83 97 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 C10orf142B7Z368 130 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 CHKB-CPT1BH3BT56 60 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 COX6CP09669 75 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 EDDM3BP56851 147 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 SMIM11AP58511 58 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 PATE1Q8WXA2 126 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 LIMD2Q9BT23 127 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 CDC42SE2Q9NRR3 84 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
CNOT1-203ENST00000562046 TOP2AP11388 1531 aaKnown RBP1.45□□□□□ -2.18
CNOT1-203ENST00000562046 CUL9Q8IWT3 2517 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 PREX1Q8TCU6 1659 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 TNRC6BQ9UPQ9 1833 aaKnown RBP1.45□□□□□ -2.18
CNOT1-203ENST00000562046 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
CNOT1-203ENST00000562046 MYO7BQ6PIF6 2116 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 PIK3C2BO00750 1634 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 A0A0J9YY99 117 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 TMEM14DPA8MWL7 114 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 F8WEM9 126 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 SFTA3P0C7M3 94 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 ZNF56Q15929 161 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 DEFB121Q5J5C9 76 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 NDUFA4L2Q9NRX3 87 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 MRPL36Q9P0J6 103 aaKnown RBP1.45□□□□□ -2.18
CNOT1-203ENST00000562046 ORMDL1Q9P0S3 153 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 GLI2P10070 1586 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 FREM1Q5H8C1 2179 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 EHBP1L1Q8N3D4 1523 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 PI4KAP42356 2102 aa1.45□□□□□ -2.18
CNOT1-203ENST00000562046 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 TRBV6-8A0A0A6YYG3 113 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 LOC101927531A0A1B0GV80 90 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 FAM223BA6NKX1 122 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 IQCF6A8MYZ5 107 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 HMGN2P05204 90 aaKnown RBP1.44□□□□□ -2.18
CNOT1-203ENST00000562046 XAF1Q6GPH4 301 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 C20orf197Q8N268 126 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 DYNLRB1Q9NP97 96 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 TMEM14BQ9NUH8 114 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 PCDH15Q96QU1 1955 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 UNC13CQ8NB66 2214 aa1.44□□□□□ -2.18
CNOT1-203ENST00000562046 RREB1Q92766 1687 aa1.43□□□□□ -2.18
CNOT1-203ENST00000562046 ARFGEF3Q5TH69 2177 aa1.43□□□□□ -2.18
CNOT1-203ENST00000562046 HMGN4O00479 90 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms