RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.05
HERC1-214ENST00000561400 XCL2Q9UBD3 114 aa8.46□□□□□ -1.05
HERC1-214ENST00000561400 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.06
HERC1-214ENST00000561400 A0A0U1RQV1 116 aa8.46□□□□□ -1.06
HERC1-214ENST00000561400 hADV29S1A0JD25 119 aa8.46□□□□□ -1.06
HERC1-214ENST00000561400 ZFAND2AQ8N6M9 145 aa8.46□□□□□ -1.06
HERC1-214ENST00000561400 FMC1Q96HJ9 113 aa8.46□□□□□ -1.06
HERC1-214ENST00000561400 APOC4P55056 127 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 PRR9Q5T870 116 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
HERC1-214ENST00000561400 Q86TA4 180 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 COL7A1Q02388 2944 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 TENM3Q9P273 2699 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 NDUFC2O95298 119 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 TCL1BO95988 128 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 CSNK1G2-AS1Q8NCQ2 148 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 C8orf49Q96NF6 230 aa8.45□□□□□ -1.06
HERC1-214ENST00000561400 TRBV6-1A0A0K0K1D8 114 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 KLLNB2CW77 178 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 H3BVH4 76 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 RPL13AP40429 203 aaKnown RBP8.44□□□□□ -1.06
HERC1-214ENST00000561400 FAM240AA0A1B0GVK7 77 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 A0A1B0GXF2 115 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
HERC1-214ENST00000561400 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 LEPP41159 167 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
HERC1-214ENST00000561400 DEFB135Q30KP9 77 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 CENPWQ5EE01 88 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 IGF2BP2-AS1Q96M15 143 aa8.44□□□□□ -1.06
HERC1-214ENST00000561400 NPYP01303 97 aa8.43□□□□□ -1.06
HERC1-214ENST00000561400 RNASE4P34096 147 aaKnown RBP8.43□□□□□ -1.06
HERC1-214ENST00000561400 ZFP2Q6ZN57 461 aa8.43□□□□□ -1.06
HERC1-214ENST00000561400 SLC25A20O43772 301 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 ZNF80P51504 273 aaPredicted RBP8.42□□□□□ -1.06
HERC1-214ENST00000561400 C1orf158Q8N1D5 194 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 CYSTM1Q9H1C7 97 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 C19orf71A6NCJ1 209 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 B9D2Q9BPU9 175 aa8.42□□□□□ -1.06
HERC1-214ENST00000561400 CACNG7P62955 275 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 ZNF56Q15929 161 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 INSP01308 110 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 CRIP1P50238 77 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
HERC1-214ENST00000561400 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 PRM2P04554 102 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 OVOL2Q9BRP0 275 aa8.4□□□□□ -1.06
HERC1-214ENST00000561400 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
HERC1-214ENST00000561400 HIST1H4GQ99525 98 aa8.39□□□□□ -1.07
HERC1-214ENST00000561400 HUWE1Q7Z6Z7 4374 aaKnown RBP8.39□□□□□ -1.07
HERC1-214ENST00000561400 HBBP68871 147 aa8.39□□□□□ -1.07
HERC1-214ENST00000561400 CT83Q5H943 113 aa8.39□□□□□ -1.07
HERC1-214ENST00000561400 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
HERC1-214ENST00000561400 TIMM8BQ9Y5J9 83 aaPredicted RBP8.39□□□□□ -1.07
HERC1-214ENST00000561400 SPRY2O43597 315 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
HERC1-214ENST00000561400 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 C11orf21Q9P2W6 132 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 P0DMU3 169 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 X6R8D5 127 aa8.38□□□□□ -1.07
HERC1-214ENST00000561400 TRAV21A0A0B4J279 112 aa8.37□□□□□ -1.07
HERC1-214ENST00000561400 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
HERC1-214ENST00000561400 ATOX1O00244 68 aa8.37□□□□□ -1.07
HERC1-214ENST00000561400 SH2D1AO60880 128 aa8.37□□□□□ -1.07
HERC1-214ENST00000561400 HTN1P15515 57 aa8.37□□□□□ -1.07
HERC1-214ENST00000561400 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
HERC1-214ENST00000561400 TGP01266 2768 aa8.36□□□□□ -1.07
HERC1-214ENST00000561400 A0A096LNJ9 63 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 HIGD1CA8MV81 97 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 IGHV1OR15-1A0A075B7D0 117 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 UBE2D1P51668 147 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 HERVK_113P61574 105 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 ZMAT4Q9H898 229 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
HERC1-214ENST00000561400 CXCL5P42830 114 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
HERC1-214ENST00000561400 Q8NAQ8 132 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
HERC1-214ENST00000561400 GNRH2O43555 120 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms