RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 H3BUT2 72 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 H7C423 109 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 K7EP13 123 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 FHL2Q14192 279 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 RAB37Q96AX2 223 aa13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 GEMIN7Q9H840 131 aaKnown RBP13.56□□□□□ -0.24
HMBOX1-215ENST00000560599 NSD1Q96L73 2696 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-215ENST00000560599 UBE2L6O14933 153 aa13.55□□□□□ -0.24
HMBOX1-215ENST00000560599 TIRAPP58753 221 aa13.55□□□□□ -0.24
HMBOX1-215ENST00000560599 NTM-AS1Q6ZSK4 140 aa13.55□□□□□ -0.24
HMBOX1-215ENST00000560599 GTF2H5Q6ZYL4 71 aa13.55□□□□□ -0.24
HMBOX1-215ENST00000560599 FN1P02751 2386 aaKnown RBP13.54□□□□□ -0.24
HMBOX1-215ENST00000560599 A0A1B0GWB2 263 aa13.54□□□□□ -0.24
HMBOX1-215ENST00000560599 LYRM9A8MSI8 78 aa13.54□□□□□ -0.24
HMBOX1-215ENST00000560599 LINC00694P0DN24 101 aa13.54□□□□□ -0.24
HMBOX1-215ENST00000560599 SRSF9Q13242 221 aaKnown RBP eCLIP13.54□□□□□ -0.24
HMBOX1-215ENST00000560599 IGLV5-45A0A087WSX0 123 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 A0A1W2PPM0 123 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 K7ERJ3 54 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
HMBOX1-215ENST00000560599 FABP2P12104 132 aa13.52□□□□□ -0.25
HMBOX1-215ENST00000560599 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
HMBOX1-215ENST00000560599 LOC100131303A0A0U1RQF7 123 aa13.51□□□□□ -0.25
HMBOX1-215ENST00000560599 K7EP34 96 aa13.51□□□□□ -0.25
HMBOX1-215ENST00000560599 IGHV3-30-3P0DP02 117 aa13.51□□□□□ -0.25
HMBOX1-215ENST00000560599 HERVK_113P63121 156 aa13.51□□□□□ -0.25
HMBOX1-215ENST00000560599 SAMD5Q5TGI4 173 aa13.51□□□□□ -0.25
HMBOX1-215ENST00000560599 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
HMBOX1-215ENST00000560599 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
HMBOX1-215ENST00000560599 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
HMBOX1-215ENST00000560599 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
HMBOX1-215ENST00000560599 VSIG2Q96IQ7 327 aa13.5□□□□□ -0.25
HMBOX1-215ENST00000560599 C2CD3Q4AC94 2353 aa13.49□□□□□ -0.25
HMBOX1-215ENST00000560599 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
HMBOX1-215ENST00000560599 TMEM238C9JI98 176 aa13.48□□□□□ -0.25
HMBOX1-215ENST00000560599 DEFB135Q30KP9 77 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 NAA38Q9BRA0 125 aaKnown RBP13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 CDC42SE2Q9NRR3 84 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 SPCS1Q9Y6A9 102 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 IGLL5B9A064 214 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 IGHV3-30P01768 117 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 IGHV3-30-5P0DP03 117 aa13.47□□□□□ -0.25
HMBOX1-215ENST00000560599 NOTCH2Q04721 2471 aa13.46□□□□□ -0.25
HMBOX1-215ENST00000560599 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.26
HMBOX1-215ENST00000560599 MIFP14174 115 aa13.46□□□□□ -0.26
HMBOX1-215ENST00000560599 FAM222AQ5U5X8 452 aa13.46□□□□□ -0.26
HMBOX1-215ENST00000560599 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 A0A0J9YXY3 114 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 ZFAND6Q6FIF0 208 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 C10orf126Q8N4M7 172 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 NDUFA12Q9UI09 145 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 PRO0255Q9UI72 69 aa13.45□□□□□ -0.26
HMBOX1-215ENST00000560599 IGHV4-28A0A0C4DH34 117 aa13.44□□□□□ -0.26
HMBOX1-215ENST00000560599 LINC00242Q5T6M2 205 aa13.44□□□□□ -0.26
HMBOX1-215ENST00000560599 CDKN2A-AS1Q9UH64 79 aa13.44□□□□□ -0.26
HMBOX1-215ENST00000560599 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
HMBOX1-215ENST00000560599 GYPEP15421 78 aa13.43□□□□□ -0.26
HMBOX1-215ENST00000560599 GAGE6Q13070 117 aa13.42□□□□□ -0.26
HMBOX1-215ENST00000560599 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
HMBOX1-215ENST00000560599 ATP6V0E2Q8NHE4 81 aa13.42□□□□□ -0.26
HMBOX1-215ENST00000560599 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
HMBOX1-215ENST00000560599 TRAV13-1A0A0B4J241 112 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 TIMM17BO60830 172 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 IGHV4-30-4P0DP06 118 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 RNF183Q96D59 192 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 SPANXDQ9BXN6 97 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 SPANXCQ9NY87 97 aa13.41□□□□□ -0.26
HMBOX1-215ENST00000560599 NDUFA1O15239 70 aa13.4□□□□□ -0.26
HMBOX1-215ENST00000560599 DAD1P61803 113 aa13.4□□□□□ -0.26
HMBOX1-215ENST00000560599 COX6A2Q02221 97 aa13.4□□□□□ -0.26
HMBOX1-215ENST00000560599 Q8NAQ8 132 aa13.4□□□□□ -0.26
HMBOX1-215ENST00000560599 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
HMBOX1-215ENST00000560599 TEX48A0A1B0GUV7 120 aa13.39□□□□□ -0.27
HMBOX1-215ENST00000560599 PAX4O43316 350 aa13.39□□□□□ -0.27
HMBOX1-215ENST00000560599 LYRM7Q5U5X0 104 aa13.39□□□□□ -0.27
HMBOX1-215ENST00000560599 SHISA2Q6UWI4 295 aa13.39□□□□□ -0.27
HMBOX1-215ENST00000560599 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
HMBOX1-215ENST00000560599 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
HMBOX1-215ENST00000560599 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
HMBOX1-215ENST00000560599 APOMO95445 188 aa13.38□□□□□ -0.27
HMBOX1-215ENST00000560599 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
HMBOX1-215ENST00000560599 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
HMBOX1-215ENST00000560599 ATP5G1P05496 136 aa13.36□□□□□ -0.27
HMBOX1-215ENST00000560599 MIAQ16674 131 aa13.36□□□□□ -0.27
HMBOX1-215ENST00000560599 C3orf56Q8N813 242 aa13.36□□□□□ -0.27
HMBOX1-215ENST00000560599 LITAFQ99732 161 aa13.36□□□□□ -0.27
HMBOX1-215ENST00000560599 MUSTN1Q8IVN3 82 aa13.35□□□□□ -0.27
HMBOX1-215ENST00000560599 A4D1N5 150 aa13.34□□□□□ -0.27
HMBOX1-215ENST00000560599 F5H768 121 aa13.34□□□□□ -0.27
HMBOX1-215ENST00000560599 TSPAN13O95857 204 aa13.34□□□□□ -0.27
HMBOX1-215ENST00000560599 CFC1BP0CG36 223 aa13.34□□□□□ -0.27
HMBOX1-215ENST00000560599 CFC1P0CG37 223 aa13.34□□□□□ -0.27
HMBOX1-215ENST00000560599 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
HMBOX1-215ENST00000560599 A8MZ25 164 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms