RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RBX1P62877 108 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 LINC00173Q6ZV60 143 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 Q8N976 141 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 CHCHD5Q9BSY4 110 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 PYGO1Q9Y3Y4 419 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 CSDC2Q9Y534 153 aaKnown RBP6.34□□□□□ -1.39
HERC1-206ENST00000559996 TRAV8-6A0A0B4J262 113 aa6.33□□□□□ -1.4
HERC1-206ENST00000559996 SIVA1O15304 175 aa6.33□□□□□ -1.4
HERC1-206ENST00000559996 BTF3P20290 206 aaKnown RBP6.33□□□□□ -1.4
HERC1-206ENST00000559996 SNRPEP62304 92 aaKnown RBP6.33□□□□□ -1.4
HERC1-206ENST00000559996 LINC01556Q5JQF7 62 aa6.33□□□□□ -1.4
HERC1-206ENST00000559996 LINC00476Q8WZB0 136 aa6.33□□□□□ -1.4
HERC1-206ENST00000559996 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
HERC1-206ENST00000559996 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 HSBP1O75506 76 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 HBDP02042 147 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 ZC2HC1BQ5TFG8 222 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 ERASQ7Z444 233 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 AMELXQ99217 191 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 CYSLTR1Q9Y271 337 aa6.32□□□□□ -1.4
HERC1-206ENST00000559996 TMEM262E9PQX1 116 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 MRPS36P82909 103 aaKnown RBP6.31□□□□□ -1.4
HERC1-206ENST00000559996 TIMM17AQ99595 171 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 SPANXA1Q9NS26 97 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 PRR34Q9NV39 138 aa6.31□□□□□ -1.4
HERC1-206ENST00000559996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
HERC1-206ENST00000559996 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
HERC1-206ENST00000559996 NPSP0C0P6 89 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
HERC1-206ENST00000559996 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
HERC1-206ENST00000559996 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 Q6ZR54 194 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 Q6ZUT4 128 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 ZNF664Q8N3J9 261 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 PACRGQ96M98 296 aaPredicted RBP6.3□□□□□ -1.4
HERC1-206ENST00000559996 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
HERC1-206ENST00000559996 DNAH6Q9C0G6 4158 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 IBA57-AS1B1ANH7 110 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 UBE2L6O14933 153 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 G0S2P27469 103 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 KRTAP26-1Q6PEX3 210 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 SPATA12Q7Z6I5 190 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 UBE2DNLQ8IWF7 75 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
HERC1-206ENST00000559996 HYDINQ4G0P3 5121 aa6.29□□□□□ -1.4
HERC1-206ENST00000559996 A0A087WX48 190 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 PRSS29PA6NIE9 313 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 LY6G6CO95867 125 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 ANGP03950 147 aaKnown RBP6.28□□□□□ -1.4
HERC1-206ENST00000559996 FABP4P15090 132 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 AMMECR1LQ6DCA0 310 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 OR5A1Q8NGJ0 315 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
HERC1-206ENST00000559996 LCE6AA0A183 80 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.27□□□□□ -1.41
HERC1-206ENST00000559996 S100A6P06703 90 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 PKIAP61925 76 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 REG3AQ06141 175 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 CST9LQ9H4G1 147 aa6.27□□□□□ -1.41
HERC1-206ENST00000559996 K7EP13 123 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 ATP5LO75964 103 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 UBE2D1P51668 147 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 COX6A2Q02221 97 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 DGAT2L7PQ6IED9 249 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
HERC1-206ENST00000559996 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 SACSQ9NZJ4 4579 aa6.26□□□□□ -1.41
HERC1-206ENST00000559996 IGLV4-69A0A075B6H9 119 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 TRAV12-1A0A0B4J245 112 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 M0R2N4 97 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 PMVKQ15126 192 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 LINC00242Q5T6M2 205 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 MAPKAPK5-AS1Q8N8E1 139 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 UBE2WQ96B02 151 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 VCX2Q9H322 139 aa6.25□□□□□ -1.41
HERC1-206ENST00000559996 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms