RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
USP8-208ENST00000559329 SAMD5Q5TGI4 173 aa11.32□□□□□ -0.6
USP8-208ENST00000559329 CITED1Q99966 193 aa11.32□□□□□ -0.6
USP8-208ENST00000559329 TENM1Q9UKZ4 2725 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 TRBV6-4A0A1B0GX49 114 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 UBE2D1P51668 147 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 GTF2H5Q6ZYL4 71 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 GAGE12JA6NER3 117 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 GAGE4Q13068 117 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 GAGE5Q13069 117 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
USP8-208ENST00000559329 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
USP8-208ENST00000559329 IGLL5B9A064 214 aa11.3□□□□□ -0.6
USP8-208ENST00000559329 LINC00694P0DN24 101 aa11.3□□□□□ -0.6
USP8-208ENST00000559329 LINC00612Q8N6U2 182 aa11.3□□□□□ -0.6
USP8-208ENST00000559329 CSDC2Q9Y534 153 aaKnown RBP11.3□□□□□ -0.6
USP8-208ENST00000559329 IGHV3-30-3P0DP02 117 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 FABP2P12104 132 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP8-208ENST00000559329 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 IGHV3-30P01768 117 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 IGHV3-30-5P0DP03 117 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 FHL2Q14192 279 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
USP8-208ENST00000559329 IGHV1-58A0A0C4DH39 117 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 A6NJY4 79 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 TIRAPP58753 221 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 KIR2DL5BQ8NHK3 375 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 X6R8D5 127 aa11.28□□□□□ -0.6
USP8-208ENST00000559329 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
USP8-208ENST00000559329 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.6
USP8-208ENST00000559329 TRAV8-3A0A0A6YYJ7 113 aa11.27□□□□□ -0.61
USP8-208ENST00000559329 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
USP8-208ENST00000559329 DGAT2L7PQ6IED9 249 aa11.27□□□□□ -0.61
USP8-208ENST00000559329 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
USP8-208ENST00000559329 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
USP8-208ENST00000559329 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
USP8-208ENST00000559329 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
USP8-208ENST00000559329 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
USP8-208ENST00000559329 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
USP8-208ENST00000559329 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
USP8-208ENST00000559329 SPINK8P0C7L1 97 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 H7C423 109 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 COX6A2Q02221 97 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 LITAFQ99732 161 aa11.23□□□□□ -0.61
USP8-208ENST00000559329 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
USP8-208ENST00000559329 WIPF1O43516 503 aa11.22□□□□□ -0.61
USP8-208ENST00000559329 ATRQ13535 2644 aa11.21□□□□□ -0.61
USP8-208ENST00000559329 TMEM238C9JI98 176 aa11.21□□□□□ -0.61
USP8-208ENST00000559329 HERVK_113P63121 156 aa11.21□□□□□ -0.61
USP8-208ENST00000559329 ZFAND6Q6FIF0 208 aa11.21□□□□□ -0.61
USP8-208ENST00000559329 DEFB130BP0DP73 79 aa11.21□□□□□ -0.62
USP8-208ENST00000559329 DEFB130AP0DP74 79 aa11.21□□□□□ -0.62
USP8-208ENST00000559329 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.62
USP8-208ENST00000559329 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.62
USP8-208ENST00000559329 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
USP8-208ENST00000559329 A8MZ25 164 aa11.2□□□□□ -0.62
USP8-208ENST00000559329 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
USP8-208ENST00000559329 CFC1P0CG37 223 aa11.2□□□□□ -0.62
USP8-208ENST00000559329 TMEM101Q96IK0 257 aa11.19□□□□□ -0.62
USP8-208ENST00000559329 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
USP8-208ENST00000559329 UBE2L6O14933 153 aa11.19□□□□□ -0.62
USP8-208ENST00000559329 TSPAN13O95857 204 aa11.19□□□□□ -0.62
USP8-208ENST00000559329 APOMO95445 188 aa11.18□□□□□ -0.62
USP8-208ENST00000559329 APOC4P55056 127 aa11.18□□□□□ -0.62
USP8-208ENST00000559329 A4D1N5 150 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
USP8-208ENST00000559329 MUSTN1Q8IVN3 82 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 NDUFA1O15239 70 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 OCIAD2Q56VL3 154 aa11.17□□□□□ -0.62
USP8-208ENST00000559329 SMIM1B2RUZ4 78 aa11.16□□□□□ -0.62
USP8-208ENST00000559329 F5H768 121 aa11.16□□□□□ -0.62
USP8-208ENST00000559329 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
USP8-208ENST00000559329 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
USP8-208ENST00000559329 TIMM17BO60830 172 aa11.15□□□□□ -0.62
USP8-208ENST00000559329 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
USP8-208ENST00000559329 A0A0B4J2C4 111 aa11.15□□□□□ -0.62
USP8-208ENST00000559329 GAGE6Q13070 117 aa11.15□□□□□ -0.62
USP8-208ENST00000559329 NBEAL2Q6ZNJ1 2754 aa11.14□□□□□ -0.63
USP8-208ENST00000559329 RBX1P62877 108 aa11.14□□□□□ -0.63
USP8-208ENST00000559329 PRO1854Q9UHT4 67 aa11.14□□□□□ -0.63
USP8-208ENST00000559329 F8P00451 2351 aa11.14□□□□□ -0.63
USP8-208ENST00000559329 GYPEP15421 78 aa11.13□□□□□ -0.63
USP8-208ENST00000559329 MIAQ16674 131 aa11.13□□□□□ -0.63
USP8-208ENST00000559329 PRO0255Q9UI72 69 aa11.13□□□□□ -0.63
USP8-208ENST00000559329 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms