RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
TUBB3-209ENST00000555609 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
TUBB3-209ENST00000555609 HERVK_113P63121 156 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 H7C2G1 150 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 ICOSQ9Y6W8 199 aa11.68□□□□□ -0.54
TUBB3-209ENST00000555609 NAV2Q8IVL1 2488 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 CCDC168Q8NDH2 2452 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 ZFHX3Q15911 3703 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 TRIAP1O43715 76 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
TUBB3-209ENST00000555609 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 FHL3Q13643 280 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 H3BT86 120 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 STHQ8IWL8 128 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
TUBB3-209ENST00000555609 Q9UF83 564 aa11.66□□□□□ -0.54
TUBB3-209ENST00000555609 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
TUBB3-209ENST00000555609 PDZD2O15018 2839 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 PRM2P04554 102 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 XGP55808 180 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
TUBB3-209ENST00000555609 MAST4O15021 2626 aa11.65□□□□□ -0.55
TUBB3-209ENST00000555609 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
TUBB3-209ENST00000555609 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
TUBB3-209ENST00000555609 RPL36ALQ969Q0 106 aaKnown RBP11.64□□□□□ -0.55
TUBB3-209ENST00000555609 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
TUBB3-209ENST00000555609 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 TRAV4A0A0B4J268 109 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 IGHV3-38A0A0C4DH36 116 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
TUBB3-209ENST00000555609 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 K7EQD1 137 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 NTN5Q8WTR8 489 aaPredicted RBP11.61□□□□□ -0.55
TUBB3-209ENST00000555609 XCL2Q9UBD3 114 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 LST1O00453 97 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 Q6ZSV7 163 aa11.61□□□□□ -0.55
TUBB3-209ENST00000555609 CR1P17927 2039 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 Q96MF0 132 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 MYO9AB2RTY4 2548 aa11.6□□□□□ -0.55
TUBB3-209ENST00000555609 H7C423 109 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 HERV-K104P63124 156 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 A8MZ25 164 aa11.59□□□□□ -0.55
TUBB3-209ENST00000555609 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 COX6A2Q02221 97 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 MRPL23Q16540 153 aaKnown RBP11.58□□□□□ -0.56
TUBB3-209ENST00000555609 DEFB121Q5J5C9 76 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 SORL1Q92673 2214 aa11.58□□□□□ -0.56
TUBB3-209ENST00000555609 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CCL24O00175 119 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CITED1Q99966 193 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 Q9H8V8 135 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
TUBB3-209ENST00000555609 CELSR1Q9NYQ6 3014 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 Q6Q795 121 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
TUBB3-209ENST00000555609 OTOGQ6ZRI0 2925 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 FAM240AA0A1B0GVK7 77 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
TUBB3-209ENST00000555609 SNCGO76070 127 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 NTM-AS1Q6ZSK4 140 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 C16orf74Q96GX8 76 aa11.55□□□□□ -0.56
TUBB3-209ENST00000555609 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
TUBB3-209ENST00000555609 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-209ENST00000555609 CITED2Q99967 270 aaPredicted RBP11.54□□□□□ -0.56
TUBB3-209ENST00000555609 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
TUBB3-209ENST00000555609 TEX49A0A1B0GTD5 131 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 DNAJC9-AS1A6NH13 148 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 NPC2P61916 151 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 Q6ZTI0 123 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 F5H768 121 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 UBE2L6O14933 153 aa11.53□□□□□ -0.56
TUBB3-209ENST00000555609 TRBV6-4A0A1B0GX49 114 aa11.52□□□□□ -0.57
TUBB3-209ENST00000555609 COX7A2LO14548 114 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms