RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
DDB1-224ENST00000545894 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
DDB1-224ENST00000545894 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
DDB1-224ENST00000545894 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
DDB1-224ENST00000545894 RBMY1FQ15415 496 aaKnown RBP8.36□□□□□ -1.07
DDB1-224ENST00000545894 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
DDB1-224ENST00000545894 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
DDB1-224ENST00000545894 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
DDB1-224ENST00000545894 PROK1P58294 105 aa8.36□□□□□ -1.07
DDB1-224ENST00000545894 Q8N2B8 174 aa8.36□□□□□ -1.07
DDB1-224ENST00000545894 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 HTN1P15515 57 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 MIAQ16674 131 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
DDB1-224ENST00000545894 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
DDB1-224ENST00000545894 SNCGO76070 127 aa8.34□□□□□ -1.07
DDB1-224ENST00000545894 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.07
DDB1-224ENST00000545894 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
DDB1-224ENST00000545894 NDUFA7O95182 113 aa8.34□□□□□ -1.07
DDB1-224ENST00000545894 COX6CP09669 75 aa8.34□□□□□ -1.07
DDB1-224ENST00000545894 C16orf95Q9H693 158 aa8.34□□□□□ -1.07
DDB1-224ENST00000545894 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 H3BMM0 161 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
DDB1-224ENST00000545894 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 KRTAP24-1Q3LI83 254 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 CHCHD7Q9BUK0 85 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
DDB1-224ENST00000545894 PIK3CD-AS1Q5SR53 167 aa8.32□□□□□ -1.08
DDB1-224ENST00000545894 DUX3Q96PT4 197 aa8.32□□□□□ -1.08
DDB1-224ENST00000545894 TRAV4A0A0B4J268 109 aa8.32□□□□□ -1.08
DDB1-224ENST00000545894 A8MZ25 164 aa8.32□□□□□ -1.08
DDB1-224ENST00000545894 H3BT86 120 aa8.32□□□□□ -1.08
DDB1-224ENST00000545894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
DDB1-224ENST00000545894 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
DDB1-224ENST00000545894 H7C423 109 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 TIMM17BO60830 172 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 DEFB131AP59861 70 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 NPC2P61916 151 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 Q6ZSN1 163 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 Q9UF83 564 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 A8MTW9 85 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 IFITM1P13164 125 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 UBE2E2Q96LR5 201 aa8.31□□□□□ -1.08
DDB1-224ENST00000545894 Q6Q795 121 aa8.3□□□□□ -1.08
DDB1-224ENST00000545894 LINC00467Q9BRT7 94 aa8.3□□□□□ -1.08
DDB1-224ENST00000545894 SETD2Q9BYW2 2564 aaPredicted RBP8.3□□□□□ -1.08
DDB1-224ENST00000545894 FBN1P35555 2871 aaKnown RBP8.3□□□□□ -1.08
DDB1-224ENST00000545894 RBMY1BA6NDE4 496 aaKnown RBP8.29□□□□□ -1.08
DDB1-224ENST00000545894 RBMY1EA6NEQ0 496 aaKnown RBP8.29□□□□□ -1.08
DDB1-224ENST00000545894 PRM2P04554 102 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 RBMY1DP0C7P1 496 aaKnown RBP8.29□□□□□ -1.08
DDB1-224ENST00000545894 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
DDB1-224ENST00000545894 GAGE5Q13069 117 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 GAGE6Q13070 117 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 DNAJC30Q96LL9 226 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 LST1O00453 97 aa8.29□□□□□ -1.08
DDB1-224ENST00000545894 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
DDB1-224ENST00000545894 NDUFA1O15239 70 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 TIRAPP58753 221 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 IGHV3-38A0A0C4DH36 116 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 IGHV3-53P01767 116 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 KRTAP10-3P60369 221 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 JMJD1CQ15652 2540 aa8.28□□□□□ -1.08
DDB1-224ENST00000545894 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
DDB1-224ENST00000545894 SLURP1P55000 103 aa8.27□□□□□ -1.09
DDB1-224ENST00000545894 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
DDB1-224ENST00000545894 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
DDB1-224ENST00000545894 DAND5Q8N907 189 aa8.27□□□□□ -1.09
DDB1-224ENST00000545894 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
DDB1-224ENST00000545894 LINC01587Q99440 93 aa8.27□□□□□ -1.09
DDB1-224ENST00000545894 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
DDB1-224ENST00000545894 C11orf72Q8NBR9 251 aa8.26□□□□□ -1.09
DDB1-224ENST00000545894 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
DDB1-224ENST00000545894 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
DDB1-224ENST00000545894 DGAT2L7PQ6IED9 249 aa8.26□□□□□ -1.09
DDB1-224ENST00000545894 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
DDB1-224ENST00000545894 RS1O15537 224 aa8.25□□□□□ -1.09
DDB1-224ENST00000545894 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
DDB1-224ENST00000545894 DEFB136Q30KP8 78 aa8.24□□□□□ -1.09
DDB1-224ENST00000545894 MDFIQ99750 246 aa8.24□□□□□ -1.09
DDB1-224ENST00000545894 CITED2Q99967 270 aaPredicted RBP8.24□□□□□ -1.09
DDB1-224ENST00000545894 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms