RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGHV3OR16-12A0A075B7B8 117 aa12.93□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGHV3-30-3P0DP02 117 aa12.93□□□□□ -0.34
TNFAIP1-202ENST00000544907 GTSF1LQ9H1H1 148 aa12.92□□□□□ -0.34
TNFAIP1-202ENST00000544907 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 PLAC8L1A1L4L8 177 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGKV2-29A2NJV5 120 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 UBE2D3P61077 147 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 UBE2D2P62837 147 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 Q6ZTI0 123 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 Q6ZUT4 128 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 VSIG2Q96IQ7 327 aa12.91□□□□□ -0.34
TNFAIP1-202ENST00000544907 RPL24P83731 157 aaKnown RBP12.9□□□□□ -0.34
TNFAIP1-202ENST00000544907 CEMP1Q6PRD7 247 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP1-202ENST00000544907 ATRQ13535 2644 aa12.9□□□□□ -0.34
TNFAIP1-202ENST00000544907 TRBV6-4A0A1B0GX49 114 aa12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 H7C423 109 aa12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 A0A0J9YXY3 114 aa12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 DGAT2L7PQ6IED9 249 aa12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 GEMIN7Q9H840 131 aaKnown RBP12.89□□□□□ -0.35
TNFAIP1-202ENST00000544907 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 A0A0B4J2C4 111 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 TSPAN13O95857 204 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 CFC1BP0CG36 223 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 CFC1P0CG37 223 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 RNF183Q96D59 192 aa12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 NOP10Q9NPE3 64 aaKnown RBP12.88□□□□□ -0.35
TNFAIP1-202ENST00000544907 G3V4G9 280 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 TIMM17BO60830 172 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 INSL3P51460 131 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 HERVK_113P63121 156 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 PRO1854Q9UHT4 67 aa12.87□□□□□ -0.35
TNFAIP1-202ENST00000544907 TRBV20-1A0A075B6N2 111 aa12.86□□□□□ -0.35
TNFAIP1-202ENST00000544907 SPANXDQ9BXN6 97 aa12.86□□□□□ -0.35
TNFAIP1-202ENST00000544907 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
TNFAIP1-202ENST00000544907 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
TNFAIP1-202ENST00000544907 LITAFQ99732 161 aa12.85□□□□□ -0.35
TNFAIP1-202ENST00000544907 NDUFA12Q9UI09 145 aa12.85□□□□□ -0.35
TNFAIP1-202ENST00000544907 H3BMG7 143 aa12.84□□□□□ -0.35
TNFAIP1-202ENST00000544907 APOMO95445 188 aa12.84□□□□□ -0.35
TNFAIP1-202ENST00000544907 PRO0461Q9UI25 63 aa12.84□□□□□ -0.35
TNFAIP1-202ENST00000544907 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
TNFAIP1-202ENST00000544907 PF4P02776 101 aa12.83□□□□□ -0.35
TNFAIP1-202ENST00000544907 RPL35AP18077 110 aaKnown RBP12.83□□□□□ -0.35
TNFAIP1-202ENST00000544907 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.35
TNFAIP1-202ENST00000544907 IGHV3-64A0A075B6Q5 118 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 IGLV5-39A0A0G2JS06 123 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 A4D1N5 150 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
TNFAIP1-202ENST00000544907 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
TNFAIP1-202ENST00000544907 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
TNFAIP1-202ENST00000544907 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
TNFAIP1-202ENST00000544907 KIR2DL5BQ8NHK3 375 aa12.82□□□□□ -0.36
TNFAIP1-202ENST00000544907 VPS25Q9BRG1 176 aa12.82□□□□□ -0.36
TNFAIP1-202ENST00000544907 NDUFA1O15239 70 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 IFITM1P13164 125 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 TMEM243Q9BU79 118 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 CDC42SE2Q9NRR3 84 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
TNFAIP1-202ENST00000544907 SMIM9A6NGZ8 99 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 MIAQ16674 131 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 KRTAP21-3Q3LHN1 58 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 J3QR89 54 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE7O76087 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE4Q13068 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 GAGE5Q13069 117 aa12.8□□□□□ -0.36
TNFAIP1-202ENST00000544907 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
TNFAIP1-202ENST00000544907 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
TNFAIP1-202ENST00000544907 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
TNFAIP1-202ENST00000544907 MDFIQ99750 246 aa12.79□□□□□ -0.36
TNFAIP1-202ENST00000544907 LOC107984156A0A0G2JMH3 177 aa12.78□□□□□ -0.36
TNFAIP1-202ENST00000544907 WFDC2Q14508 124 aa12.78□□□□□ -0.36
TNFAIP1-202ENST00000544907 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
TNFAIP1-202ENST00000544907 ARL17AQ8IVW1 177 aa12.78□□□□□ -0.36
TNFAIP1-202ENST00000544907 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
TNFAIP1-202ENST00000544907 TRGV4A0A0C4DH28 118 aa12.77□□□□□ -0.36
TNFAIP1-202ENST00000544907 UBE2L6O14933 153 aa12.77□□□□□ -0.36
TNFAIP1-202ENST00000544907 FHL2Q14192 279 aa12.77□□□□□ -0.36
TNFAIP1-202ENST00000544907 ERG28Q9UKR5 140 aa12.77□□□□□ -0.36
TNFAIP1-202ENST00000544907 COL6A5A8TX70 2615 aa12.77□□□□□ -0.37
TNFAIP1-202ENST00000544907 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.37
TNFAIP1-202ENST00000544907 C3orf56Q8N813 242 aa12.77□□□□□ -0.37
TNFAIP1-202ENST00000544907 COPS9Q8WXC6 57 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms