RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	BRK1	Q8WUW1	75 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	H1FX	Q92522	213 aa	Known RBP	1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	BCL2L10	Q9HD36	194 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	NXT2	Q9NPJ8	142 aa	Known RBP	1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	OSTC	Q9NRP0	149 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	NHP2	Q9NX24	153 aa	Known RBP	1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	EPDR1	Q9UM22	224 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	C22orf24	Q9Y442	160 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	HLA-DRB4	X5D2U9	266 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	ADGRB1	O14514	1584 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	ERCC6L2	Q5T890	1561 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	C5	P01031	1676 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506		A0A0G2JMZ2	1700 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	LRRC37A2	A6NM11	1700 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	LRRC37A	A6NMS7	1700 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	PHLPP1	O60346	1717 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	DOT1L	Q8TEK3	1739 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	COL14A1	Q05707	1796 aa	Known RBP	1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	MAST2	Q6P0Q8	1798 aa		1.03	□□□□□ -2.24
LEMD3-205	ENST00000544506	RALGAPA2	Q2PPJ7	1873 aa		1.03	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRAV4	A0A0B4J268	109 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRAV17	A0A0B4J275	112 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	IGHV1-58	A0A0C4DH39	117 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRBV7-6	A0A0J9YX20	115 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRBV7-7	A0A0K0K1E9	115 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	FAM236A	A0A1B0GUQ0	79 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	FAM236B	A0A1B0GV22	79 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	RBAKDN	A6NC62	111 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	CRYM-AS1	A6NIL9	109 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	CPSF4L	A6NMK7	179 aa	Known RBP	1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	LOC730098	B7Z3J9	87 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	LOC285556	D6RIA3	1793 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506		F2Z2F3	143 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	BCE1	O60756	84 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	HBD	P02042	147 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TCRA	P04437	139 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	CXCL8	P10145	99 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	SI	P14410	1827 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	S100A4	P26447	101 aa	Known RBP	1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	CKS2	P33552	79 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	DYNLT3	P51808	116 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	HBB	P68871	147 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	CCL20	P78556	96 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	QRFP	P83859	136 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	DIAPH2-AS1	Q14236	149 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	INSL4	Q14641	139 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	ZNF56	Q15929	161 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	C12orf74	Q32Q52	190 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	NHSL1	Q5SYE7	1610 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	KCP	Q6ZWJ8	1503 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	LINC00643	Q86TS7	51 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	PRR15	Q8IV56	129 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	DYNLRB2	Q8TF09	96 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	SPTSSA	Q969W0	71 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	IFI27L1	Q96BM0	104 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	C11orf68	Q9H3H3	251 aa	Known RBP	1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TMEM167B	Q9NRX6	74 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	TAS2R4	Q9NYW5	299 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	PSENEN	Q9NZ42	101 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	HILPDA	Q9Y5L2	63 aa		1.02	□□□□□ -2.25
LEMD3-205	ENST00000544506	SPTB	P11277	2137 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PLXNA2	O75051	1894 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	OBSL1	O75147	1896 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PLXNA1	Q9UIW2	1896 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	DUOX1	Q9NRD9	1551 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	COL1A1	P02452	1464 aa	Predicted RBP	1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	CD163L1	Q9NR16	1453 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRBV20OR9-2	A0A075B6H5	130 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRBV25-1	A0A075B6N4	114 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	TRAV3	A0A0B4J244	114 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	SMIM27	A0A1W2PRY6	76 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	TCRBV4S1A1T	A0A5B7	111 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	hADV29S1	A0JD25	119 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	CCL16	O15467	120 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PPP1R17	O96001	155 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PPY	P01298	95 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	RNASE3	P12724	160 aa	Known RBP	1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PLN	P26678	52 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	FKBP2	P26885	142 aa	Known RBP	1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	SPRN	Q5BIV9	151 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	C1orf140	Q5VVS0	124 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506		Q5XG85	94 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	MIC13	Q5XKP0	118 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	C2orf82	Q6UX34	121 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506		Q6ZS49	121 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	SBSPON	Q8IVN8	264 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	CLECL1	Q8IZS7	167 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	EXOC3-AS1	Q8N2X6	119 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	MORN4	Q8NDC4	146 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	LINC01600	Q96MT4	127 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	ZNF714	Q96N38	554 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	AMELY	Q99218	206 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	WFDC6	Q9BQY6	131 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	DPH3P1	Q9H4G8	78 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	OTOR	Q9NRC9	128 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	PRO1854	Q9UHT4	67 aa		1.01	□□□□□ -2.25
LEMD3-205	ENST00000544506	SNURF	Q9Y675	71 aa		1.01	□□□□□ -2.25

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