RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 HLA-DQA1P01909 254 aa9.05□□□□□ -0.96
LTBR-213ENST00000544454 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
LTBR-213ENST00000544454 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
LTBR-213ENST00000544454 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
LTBR-213ENST00000544454 LECT2O14960 151 aa9.04□□□□□ -0.96
LTBR-213ENST00000544454 RAB5AP20339 215 aa9.04□□□□□ -0.96
LTBR-213ENST00000544454 WFDC2Q14508 124 aa9.04□□□□□ -0.96
LTBR-213ENST00000544454 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
LTBR-213ENST00000544454 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
LTBR-213ENST00000544454 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 IGLV10-54A0A075B6I4 117 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 MT-ND6P03923 174 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 SLC7A5P1Q8MH63 180 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 TIMM21Q9BVV7 248 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
LTBR-213ENST00000544454 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.97
LTBR-213ENST00000544454 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
LTBR-213ENST00000544454 Q8N8P6 123 aa9.02□□□□□ -0.97
LTBR-213ENST00000544454 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
LTBR-213ENST00000544454 K7EMI3 77 aa9.01□□□□□ -0.97
LTBR-213ENST00000544454 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
LTBR-213ENST00000544454 KIAA1644Q3SXP7 199 aa9.01□□□□□ -0.97
LTBR-213ENST00000544454 TGIF2-C20orf24A0A0A6YYL0 155 aa9□□□□□ -0.97
LTBR-213ENST00000544454 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
LTBR-213ENST00000544454 GCSHP23434 173 aa9□□□□□ -0.97
LTBR-213ENST00000544454 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
LTBR-213ENST00000544454 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
LTBR-213ENST00000544454 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
LTBR-213ENST00000544454 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
LTBR-213ENST00000544454 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
LTBR-213ENST00000544454 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
LTBR-213ENST00000544454 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
LTBR-213ENST00000544454 MRPL18Q9H0U6 180 aaKnown RBP8.99□□□□□ -0.97
LTBR-213ENST00000544454 SPANXA1Q9NS26 97 aa8.99□□□□□ -0.97
LTBR-213ENST00000544454 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
LTBR-213ENST00000544454 CCL25O15444 150 aa8.98□□□□□ -0.97
LTBR-213ENST00000544454 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
LTBR-213ENST00000544454 SS18Q15532 418 aa8.98□□□□□ -0.97
LTBR-213ENST00000544454 ORMDL2Q53FV1 153 aa8.98□□□□□ -0.97
LTBR-213ENST00000544454 PYGO1Q9Y3Y4 419 aa8.98□□□□□ -0.97
LTBR-213ENST00000544454 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
LTBR-213ENST00000544454 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 G0S2P27469 103 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
LTBR-213ENST00000544454 YPEL4Q96NS1 127 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 SMCO4Q9NRQ5 59 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 TRAPPC1Q9Y5R8 145 aa8.97□□□□□ -0.97
LTBR-213ENST00000544454 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
LTBR-213ENST00000544454 CFAP161Q6P656 301 aa8.96□□□□□ -0.98
LTBR-213ENST00000544454 Q6ZUT4 128 aa8.96□□□□□ -0.98
LTBR-213ENST00000544454 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.98
LTBR-213ENST00000544454 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
LTBR-213ENST00000544454 HERC2O95714 4834 aa8.96□□□□□ -0.98
LTBR-213ENST00000544454 PRSS1P07477 247 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 XCL1P47992 114 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 FOXI1Q12951 378 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 FAM104AQ969W3 186 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 RYR1P21817 5038 aa8.95□□□□□ -0.98
LTBR-213ENST00000544454 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
LTBR-213ENST00000544454 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
LTBR-213ENST00000544454 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
LTBR-213ENST00000544454 LINC01546A6NGU7 62 aa8.93□□□□□ -0.98
LTBR-213ENST00000544454 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
LTBR-213ENST00000544454 hDV102S1A0JD36 115 aa8.92□□□□□ -0.98
LTBR-213ENST00000544454 NPSP0C0P6 89 aa8.92□□□□□ -0.98
LTBR-213ENST00000544454 CBLN2Q8IUK8 224 aa8.92□□□□□ -0.98
LTBR-213ENST00000544454 HSPG2P98160 4391 aa8.92□□□□□ -0.98
LTBR-213ENST00000544454 DNAH8Q96JB1 4490 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 C15orf56Q8N910 161 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
LTBR-213ENST00000544454 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 LINC01549A6NIU2 74 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 IFITM10A6NMD0 228 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 COX7A2LO14548 114 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
LTBR-213ENST00000544454 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
LTBR-213ENST00000544454 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
LTBR-213ENST00000544454 XGP55808 180 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 Q6ZN92 141 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 C9orf163Q8N9P6 203 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 VCX2Q9H322 139 aa8.89□□□□□ -0.99
LTBR-213ENST00000544454 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
LTBR-213ENST00000544454 SLPIP03973 132 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 LINC00614P0C842 121 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 MALP21145 153 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 TEX43Q6ZNM6 134 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 ERASQ7Z444 233 aa8.88□□□□□ -0.99
LTBR-213ENST00000544454 AMELXQ99217 191 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms