RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
DDX55-211ENST00000544429 UBE2D4Q9Y2X8 147 aa12.58□□□□□ -0.4
DDX55-211ENST00000544429 KIAA1109Q2LD37 5005 aa12.57□□□□□ -0.4
DDX55-211ENST00000544429 LECT2O14960 151 aa12.57□□□□□ -0.4
DDX55-211ENST00000544429 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
DDX55-211ENST00000544429 YPEL4Q96NS1 127 aa12.56□□□□□ -0.4
DDX55-211ENST00000544429 MAP1LC3AQ9H492 121 aa12.56□□□□□ -0.4
DDX55-211ENST00000544429 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 MT-ND6P03923 174 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 ZNF664Q8N3J9 261 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 Q8N8P6 123 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 FAM104AQ969W3 186 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 TMEM101Q96IK0 257 aa12.55□□□□□ -0.4
DDX55-211ENST00000544429 KIAA1644Q3SXP7 199 aa12.54□□□□□ -0.4
DDX55-211ENST00000544429 TGIF2-C20orf24A0A0A6YYL0 155 aa12.53□□□□□ -0.4
DDX55-211ENST00000544429 K7EMI3 77 aa12.53□□□□□ -0.4
DDX55-211ENST00000544429 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
DDX55-211ENST00000544429 SMAGPQ0VAQ4 97 aa12.53□□□□□ -0.4
DDX55-211ENST00000544429 TMEM18Q96B42 140 aa12.53□□□□□ -0.4
DDX55-211ENST00000544429 APOBP04114 4563 aaKnown RBP12.53□□□□□ -0.4
DDX55-211ENST00000544429 LOC389332A0A1B0GUA5 103 aa12.52□□□□□ -0.41
DDX55-211ENST00000544429 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.41
DDX55-211ENST00000544429 HSPG2P98160 4391 aa12.52□□□□□ -0.41
DDX55-211ENST00000544429 LINC00959A0A1B0GUT2 108 aa12.51□□□□□ -0.41
DDX55-211ENST00000544429 USP17L23D6RBM5 183 aa12.51□□□□□ -0.41
DDX55-211ENST00000544429 CDK2AP2O75956 126 aa12.51□□□□□ -0.41
DDX55-211ENST00000544429 RAB5AP20339 215 aa12.51□□□□□ -0.41
DDX55-211ENST00000544429 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
DDX55-211ENST00000544429 NXT2Q9NPJ8 142 aaKnown RBP12.51□□□□□ -0.41
DDX55-211ENST00000544429 SPANXA1Q9NS26 97 aa12.51□□□□□ -0.41
DDX55-211ENST00000544429 IGLV5-52A0A0A0MRZ9 124 aa12.5□□□□□ -0.41
DDX55-211ENST00000544429 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
DDX55-211ENST00000544429 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
DDX55-211ENST00000544429 CHCHD10Q8WYQ3 142 aaPredicted RBP12.5□□□□□ -0.41
DDX55-211ENST00000544429 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
DDX55-211ENST00000544429 GCSHP23434 173 aa12.49□□□□□ -0.41
DDX55-211ENST00000544429 IFI27P40305 119 aaPredicted RBP12.49□□□□□ -0.41
DDX55-211ENST00000544429 MRPS36P82909 103 aaKnown RBP12.49□□□□□ -0.41
DDX55-211ENST00000544429 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
DDX55-211ENST00000544429 Q6ZUT4 128 aa12.49□□□□□ -0.41
DDX55-211ENST00000544429 PYGO1Q9Y3Y4 419 aa12.49□□□□□ -0.41
DDX55-211ENST00000544429 GAGE12HA6NDE8 117 aa12.48□□□□□ -0.41
DDX55-211ENST00000544429 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
DDX55-211ENST00000544429 PRSS1P07477 247 aa12.48□□□□□ -0.41
DDX55-211ENST00000544429 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.47□□□□□ -0.41
DDX55-211ENST00000544429 CCL25O15444 150 aa12.47□□□□□ -0.41
DDX55-211ENST00000544429 FOXI1Q12951 378 aa12.47□□□□□ -0.41
DDX55-211ENST00000544429 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
DDX55-211ENST00000544429 HERC2O95714 4834 aa12.46□□□□□ -0.41
DDX55-211ENST00000544429 FABP9Q0Z7S8 132 aa12.46□□□□□ -0.41
DDX55-211ENST00000544429 RNASE13Q5GAN3 156 aaKnown RBP12.45□□□□□ -0.42
DDX55-211ENST00000544429 C15orf56Q8N910 161 aa12.45□□□□□ -0.42
DDX55-211ENST00000544429 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
DDX55-211ENST00000544429 RYR1P21817 5038 aa12.45□□□□□ -0.42
DDX55-211ENST00000544429 SS18Q15532 418 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 C2orf66Q6UXQ4 117 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 TRAPPC1Q9Y5R8 145 aa12.44□□□□□ -0.42
DDX55-211ENST00000544429 DNAH8Q96JB1 4490 aa12.43□□□□□ -0.42
DDX55-211ENST00000544429 IGLV4-3A0A075B6K6 122 aa12.43□□□□□ -0.42
DDX55-211ENST00000544429 C1orf196B1AJZ1 125 aa12.43□□□□□ -0.42
DDX55-211ENST00000544429 XCL1P47992 114 aa12.43□□□□□ -0.42
DDX55-211ENST00000544429 CYSLTR1Q9Y271 337 aa12.43□□□□□ -0.42
DDX55-211ENST00000544429 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
DDX55-211ENST00000544429 NPSP0C0P6 89 aa12.42□□□□□ -0.42
DDX55-211ENST00000544429 Q6ZSA8 131 aa12.42□□□□□ -0.42
DDX55-211ENST00000544429 XGP55808 180 aa12.41□□□□□ -0.42
DDX55-211ENST00000544429 CNBPP62633 177 aaKnown RBP12.41□□□□□ -0.42
DDX55-211ENST00000544429 PRSS3P2Q8NHM4 247 aa12.41□□□□□ -0.42
DDX55-211ENST00000544429 GVQW2A0A096LPI5 108 aaPredicted RBP12.4□□□□□ -0.42
DDX55-211ENST00000544429 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
DDX55-211ENST00000544429 SLPIP03973 132 aa12.4□□□□□ -0.42
DDX55-211ENST00000544429 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
DDX55-211ENST00000544429 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
DDX55-211ENST00000544429 KRTAP17-1Q9BYP8 105 aa12.4□□□□□ -0.42
DDX55-211ENST00000544429 G0S2P27469 103 aa12.39□□□□□ -0.43
DDX55-211ENST00000544429 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
DDX55-211ENST00000544429 LINC00173Q6ZV60 143 aa12.39□□□□□ -0.43
DDX55-211ENST00000544429 TMEM141Q96I45 108 aa12.39□□□□□ -0.43
DDX55-211ENST00000544429 LINC01620Q4KN68 170 aa12.38□□□□□ -0.43
DDX55-211ENST00000544429 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
DDX55-211ENST00000544429 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
DDX55-211ENST00000544429 AMELXQ99217 191 aa12.38□□□□□ -0.43
DDX55-211ENST00000544429 FAM30AQ9NZY2 134 aa12.38□□□□□ -0.43
DDX55-211ENST00000544429 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
DDX55-211ENST00000544429 hDV102S1A0JD36 115 aa12.37□□□□□ -0.43
DDX55-211ENST00000544429 TIMM17AQ99595 171 aa12.37□□□□□ -0.43
DDX55-211ENST00000544429 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
DDX55-211ENST00000544429 IGHV1-58A0A0C4DH39 117 aa12.35□□□□□ -0.43
DDX55-211ENST00000544429 LINC01549A6NIU2 74 aa12.35□□□□□ -0.43
DDX55-211ENST00000544429 ERASQ7Z444 233 aa12.35□□□□□ -0.43
DDX55-211ENST00000544429 COX7A2LO14548 114 aa12.34□□□□□ -0.43
DDX55-211ENST00000544429 UBE2D1P51668 147 aa12.34□□□□□ -0.43
DDX55-211ENST00000544429 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
DDX55-211ENST00000544429 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
DDX55-211ENST00000544429 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
DDX55-211ENST00000544429 A0A096LNJ9 63 aa12.33□□□□□ -0.44
DDX55-211ENST00000544429 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms