RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 VAMP8Q9BV40 100 aa21.04■□□□□ 0.96
CCM2-219ENST00000544363 AMMECR1LQ6DCA0 310 aa21.04■□□□□ 0.96
CCM2-219ENST00000544363 Q6ZUT4 128 aa21.04■□□□□ 0.96
CCM2-219ENST00000544363 COL7A1Q02388 2944 aa21.02■□□□□ 0.96
CCM2-219ENST00000544363 DPM2O94777 84 aa21.02■□□□□ 0.96
CCM2-219ENST00000544363 PRKDCP78527 4128 aaKnown RBP21.02■□□□□ 0.96
CCM2-219ENST00000544363 TRAV9-2A0A087WT02 112 aa21.01■□□□□ 0.95
CCM2-219ENST00000544363 IGKCP01834 107 aa21.01■□□□□ 0.95
CCM2-219ENST00000544363 ZNF25P17030 456 aaPredicted RBP21.01■□□□□ 0.95
CCM2-219ENST00000544363 RNASE13Q5GAN3 156 aaKnown RBP21■□□□□ 0.95
CCM2-219ENST00000544363 OR5A1Q8NGJ0 315 aa21■□□□□ 0.95
CCM2-219ENST00000544363 TMEM101Q96IK0 257 aa21■□□□□ 0.95
CCM2-219ENST00000544363 MEGF8Q7Z7M0 2845 aa21■□□□□ 0.95
CCM2-219ENST00000544363 TIRAPP58753 221 aa21■□□□□ 0.95
CCM2-219ENST00000544363 MAJINQ3KP22 176 aa21■□□□□ 0.95
CCM2-219ENST00000544363 LELP1Q5T871 98 aa21■□□□□ 0.95
CCM2-219ENST00000544363 LYPD5Q6UWN5 251 aa21■□□□□ 0.95
CCM2-219ENST00000544363 PAM16Q9Y3D7 125 aa21■□□□□ 0.95
CCM2-219ENST00000544363 PLNP26678 52 aa20.99■□□□□ 0.95
CCM2-219ENST00000544363 CDC42SE2Q9NRR3 84 aa20.98■□□□□ 0.95
CCM2-219ENST00000544363 ZNF664Q8N3J9 261 aa20.97■□□□□ 0.95
CCM2-219ENST00000544363 hDV102S1A0JD36 115 aa20.96■□□□□ 0.95
CCM2-219ENST00000544363 IGLV4-69A0A075B6H9 119 aa20.96■□□□□ 0.95
CCM2-219ENST00000544363 C15orf53Q8NAA6 179 aa20.96■□□□□ 0.95
CCM2-219ENST00000544363 TMEM262E9PQX1 116 aa20.95■□□□□ 0.94
CCM2-219ENST00000544363 C2orf88Q9BSF0 95 aa20.95■□□□□ 0.94
CCM2-219ENST00000544363 HSBP1L1C9JCN9 74 aa20.94■□□□□ 0.94
CCM2-219ENST00000544363 SPATA45Q537H7 98 aa20.94■□□□□ 0.94
CCM2-219ENST00000544363 IGLV4-60A0A075B6I1 120 aa20.93■□□□□ 0.94
CCM2-219ENST00000544363 A0A1B0GUV1 79 aa20.93■□□□□ 0.94
CCM2-219ENST00000544363 C11orf86A6NJI1 115 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 RBX1P62877 108 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 MPV17L2Q567V2 206 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 NFE4Q86UQ8 179 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 STPG4Q8N801 248 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 STAB2Q8WWQ8 2551 aa20.9■□□□□ 0.94
CCM2-219ENST00000544363 IGLC3P0DOY3 106 aa20.89■□□□□ 0.94
CCM2-219ENST00000544363 ESRGQ1W209 222 aa20.89■□□□□ 0.94
CCM2-219ENST00000544363 A0A0J9YXV3 536 aa20.89■□□□□ 0.93
CCM2-219ENST00000544363 IGLL5B9A064 214 aa20.89■□□□□ 0.93
CCM2-219ENST00000544363 PKIAP61925 76 aa20.89■□□□□ 0.93
CCM2-219ENST00000544363 TRAV8-6A0A0B4J262 113 aa20.88■□□□□ 0.93
CCM2-219ENST00000544363 UBE2D1P51668 147 aa20.88■□□□□ 0.93
CCM2-219ENST00000544363 PRO1933Q9H354 126 aa20.88■□□□□ 0.93
CCM2-219ENST00000544363 CHAC1Q9BUX1 264 aa20.86■□□□□ 0.93
CCM2-219ENST00000544363 ANKRD39Q53RE8 183 aa20.85■□□□□ 0.93
CCM2-219ENST00000544363 TINCRA0A1B0GVN0 87 aa20.83■□□□□ 0.93
CCM2-219ENST00000544363 TSTD3H0UI37 97 aa20.83■□□□□ 0.93
CCM2-219ENST00000544363 TRAV13-1A0A0B4J241 112 aa20.82■□□□□ 0.92
CCM2-219ENST00000544363 FAM19A3Q7Z5A8 133 aa20.82■□□□□ 0.92
CCM2-219ENST00000544363 TMEM170BQ5T4T1 132 aa20.81■□□□□ 0.92
CCM2-219ENST00000544363 Q8N3U1 123 aa20.81■□□□□ 0.92
CCM2-219ENST00000544363 ZNF22P17026 224 aaPredicted RBP20.79■□□□□ 0.92
CCM2-219ENST00000544363 TCTAP57738 103 aa20.79■□□□□ 0.92
CCM2-219ENST00000544363 LINC00242Q5T6M2 205 aa20.78■□□□□ 0.92
CCM2-219ENST00000544363 WFDC10BQ8IUB3 73 aa20.78■□□□□ 0.92
CCM2-219ENST00000544363 GEMIN7Q9H840 131 aaKnown RBP20.78■□□□□ 0.92
CCM2-219ENST00000544363 SEC11AP67812 179 aa20.78■□□□□ 0.92
CCM2-219ENST00000544363 IGKV3OR2-268A0A0C4DH90 116 aa20.77■□□□□ 0.92
CCM2-219ENST00000544363 C14orf144Q96I85 54 aa20.77■□□□□ 0.92
CCM2-219ENST00000544363 PCP4L1A6NKN8 68 aa20.76■□□□□ 0.91
CCM2-219ENST00000544363 ANGP03950 147 aaKnown RBP20.76■□□□□ 0.91
CCM2-219ENST00000544363 HERVK_113P63121 156 aa20.75■□□□□ 0.91
CCM2-219ENST00000544363 COX6A2Q02221 97 aa20.75■□□□□ 0.91
CCM2-219ENST00000544363 IGKV2D-26A0A0A0MRZ7 120 aa20.74■□□□□ 0.91
CCM2-219ENST00000544363 HERVK_113P61574 105 aa20.74■□□□□ 0.91
CCM2-219ENST00000544363 LINC00269Q8N2A0 174 aa20.74■□□□□ 0.91
CCM2-219ENST00000544363 IGLV5-45A0A087WSX0 123 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 LINC00959A0A1B0GUT2 108 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 NUPR2A6NF83 97 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 NMUP48645 174 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 CCL18P55774 89 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 LINC00469Q8N7U9 141 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 LINC00588Q9Y4M8 146 aa20.73■□□□□ 0.91
CCM2-219ENST00000544363 TMEM223A0PJW6 202 aa20.72■□□□□ 0.91
CCM2-219ENST00000544363 E9PLD3 99 aa20.72■□□□□ 0.91
CCM2-219ENST00000544363 IGHV3-30P01768 117 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 IGHV3-33P01772 117 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 IGHV3-30-3P0DP02 117 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 IGHV3-30-5P0DP03 117 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 CLPSL2Q6UWE3 100 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 MRPS16Q9Y3D3 137 aaKnown RBP20.71■□□□□ 0.91
CCM2-219ENST00000544363 DYNC2H1Q8NCM8 4307 aaKnown RBP20.71■□□□□ 0.91
CCM2-219ENST00000544363 COX8AP10176 69 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 MIEN1Q9BRT3 115 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 UQCR10Q9UDW1 63 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 APLNQ9ULZ1 77 aa20.71■□□□□ 0.91
CCM2-219ENST00000544363 REG3AQ06141 175 aa20.7■□□□□ 0.9
CCM2-219ENST00000544363 CDKN2A-AS1Q9UH64 79 aa20.7■□□□□ 0.9
CCM2-219ENST00000544363 KLK5Q9Y337 293 aaPredicted RBP20.69■□□□□ 0.9
CCM2-219ENST00000544363 CCL25O15444 150 aa20.68■□□□□ 0.9
CCM2-219ENST00000544363 SS18Q15532 418 aa20.68■□□□□ 0.9
CCM2-219ENST00000544363 KLK12Q9UKR0 248 aa20.68■□□□□ 0.9
CCM2-219ENST00000544363 FBN3Q75N90 2809 aa20.68■□□□□ 0.9
CCM2-219ENST00000544363 DNAH7Q8WXX0 4024 aa20.67■□□□□ 0.9
CCM2-219ENST00000544363 H3BRM9 83 aa20.67■□□□□ 0.9
CCM2-219ENST00000544363 LINC01556Q5JQF7 62 aa20.67■□□□□ 0.9
CCM2-219ENST00000544363 SLC25A34Q6PIV7 304 aa20.67■□□□□ 0.9
CCM2-219ENST00000544363 PCP2Q8IVA1 136 aa20.66■□□□□ 0.9
CCM2-219ENST00000544363 PRR34Q9NV39 138 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms