RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
RABGGTA-203ENST00000543002 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
RABGGTA-203ENST00000543002 ZNF664Q8N3J9 261 aa11.36□□□□□ -0.59
RABGGTA-203ENST00000543002 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
RABGGTA-203ENST00000543002 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
RABGGTA-203ENST00000543002 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 FAT2Q9NYQ8 4349 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 COLCA2A8K830 154 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 EREGO14944 169 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 SPANXA1Q9NS26 97 aa11.35□□□□□ -0.59
RABGGTA-203ENST00000543002 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 LINC01546A6NGU7 62 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 SCO1O75880 301 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 CYSLTR1Q9Y271 337 aa11.34□□□□□ -0.59
RABGGTA-203ENST00000543002 G0S2P27469 103 aa11.33□□□□□ -0.6
RABGGTA-203ENST00000543002 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
RABGGTA-203ENST00000543002 Q6ZUT4 128 aa11.33□□□□□ -0.6
RABGGTA-203ENST00000543002 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
RABGGTA-203ENST00000543002 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
RABGGTA-203ENST00000543002 MRPS36P82909 103 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-203ENST00000543002 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
RABGGTA-203ENST00000543002 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
RABGGTA-203ENST00000543002 WFDC2Q14508 124 aa11.31□□□□□ -0.6
RABGGTA-203ENST00000543002 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
RABGGTA-203ENST00000543002 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
RABGGTA-203ENST00000543002 TRGC2P03986 189 aa11.3□□□□□ -0.6
RABGGTA-203ENST00000543002 S100A1P23297 94 aa11.3□□□□□ -0.6
RABGGTA-203ENST00000543002 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-203ENST00000543002 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
RABGGTA-203ENST00000543002 LECT2O14960 151 aa11.29□□□□□ -0.6
RABGGTA-203ENST00000543002 KRTAP10-2P60368 255 aa11.29□□□□□ -0.6
RABGGTA-203ENST00000543002 SS18Q15532 418 aa11.29□□□□□ -0.6
RABGGTA-203ENST00000543002 Q8N814 137 aa11.29□□□□□ -0.6
RABGGTA-203ENST00000543002 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-203ENST00000543002 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 LINC00614P0C842 121 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 URB1-AS1Q96HZ7 61 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
RABGGTA-203ENST00000543002 PKD1P98161 4303 aa11.27□□□□□ -0.61
RABGGTA-203ENST00000543002 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
RABGGTA-203ENST00000543002 CCL25O15444 150 aa11.27□□□□□ -0.61
RABGGTA-203ENST00000543002 NPSP0C0P6 89 aa11.27□□□□□ -0.61
RABGGTA-203ENST00000543002 RAB5BP61020 215 aa11.27□□□□□ -0.61
RABGGTA-203ENST00000543002 EPPK1P58107 5090 aaKnown RBP11.26□□□□□ -0.61
RABGGTA-203ENST00000543002 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
RABGGTA-203ENST00000543002 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
RABGGTA-203ENST00000543002 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
RABGGTA-203ENST00000543002 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 USP17L23D6RBM5 183 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 XCL1P47992 114 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 CDPF1Q6NVV7 123 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
RABGGTA-203ENST00000543002 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
RABGGTA-203ENST00000543002 FOXI1Q12951 378 aa11.24□□□□□ -0.61
RABGGTA-203ENST00000543002 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
RABGGTA-203ENST00000543002 ERASQ7Z444 233 aa11.24□□□□□ -0.61
RABGGTA-203ENST00000543002 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
RABGGTA-203ENST00000543002 Q6ZN92 141 aa11.23□□□□□ -0.61
RABGGTA-203ENST00000543002 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
RABGGTA-203ENST00000543002 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
RABGGTA-203ENST00000543002 DNAH11Q96DT5 4516 aa11.23□□□□□ -0.61
RABGGTA-203ENST00000543002 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
RABGGTA-203ENST00000543002 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
RABGGTA-203ENST00000543002 AMELXQ99217 191 aa11.22□□□□□ -0.61
RABGGTA-203ENST00000543002 VCX2Q9H322 139 aa11.22□□□□□ -0.61
RABGGTA-203ENST00000543002 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-203ENST00000543002 A0A096LNJ9 63 aa11.21□□□□□ -0.61
RABGGTA-203ENST00000543002 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.61
RABGGTA-203ENST00000543002 CHCHD1Q96BP2 118 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-203ENST00000543002 IGLV5-52A0A0A0MRZ9 124 aa11.2□□□□□ -0.62
RABGGTA-203ENST00000543002 PRSS1P07477 247 aa11.2□□□□□ -0.62
RABGGTA-203ENST00000543002 CFAP161Q6P656 301 aa11.2□□□□□ -0.62
RABGGTA-203ENST00000543002 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
RABGGTA-203ENST00000543002 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
RABGGTA-203ENST00000543002 HBDP02042 147 aa11.19□□□□□ -0.62
RABGGTA-203ENST00000543002 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
RABGGTA-203ENST00000543002 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
RABGGTA-203ENST00000543002 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
RABGGTA-203ENST00000543002 UBE2D1P51668 147 aa11.18□□□□□ -0.62
RABGGTA-203ENST00000543002 PKHD1P08F94 4074 aa11.18□□□□□ -0.62
RABGGTA-203ENST00000543002 COX7A2LO14548 114 aa11.17□□□□□ -0.62
RABGGTA-203ENST00000543002 PDZD11Q5EBL8 140 aa11.17□□□□□ -0.62
RABGGTA-203ENST00000543002 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
RABGGTA-203ENST00000543002 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
RABGGTA-203ENST00000543002 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
RABGGTA-203ENST00000543002 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
RABGGTA-203ENST00000543002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-203ENST00000543002 HSBP1O75506 76 aa11.15□□□□□ -0.62
RABGGTA-203ENST00000543002 GCSHP23434 173 aa11.15□□□□□ -0.62
RABGGTA-203ENST00000543002 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms