RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
DDB1-218ENST00000540784 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
DDB1-218ENST00000540784 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
DDB1-218ENST00000540784 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
DDB1-218ENST00000540784 FRAS1Q86XX4 4008 aa10.32□□□□□ -0.76
DDB1-218ENST00000540784 IGKV3OR2-268A0A0C4DH90 116 aa10.32□□□□□ -0.76
DDB1-218ENST00000540784 COLCA2A8K830 154 aa10.32□□□□□ -0.76
DDB1-218ENST00000540784 SCO1O75880 301 aa10.32□□□□□ -0.76
DDB1-218ENST00000540784 A0A087WTM6 91 aa10.31□□□□□ -0.76
DDB1-218ENST00000540784 S100A1P23297 94 aa10.31□□□□□ -0.76
DDB1-218ENST00000540784 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
DDB1-218ENST00000540784 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
DDB1-218ENST00000540784 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
DDB1-218ENST00000540784 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
DDB1-218ENST00000540784 A0A1B0GVY2 172 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
DDB1-218ENST00000540784 FAT2Q9NYQ8 4349 aa10.28□□□□□ -0.76
DDB1-218ENST00000540784 LINC01546A6NGU7 62 aa10.28□□□□□ -0.76
DDB1-218ENST00000540784 TRGC2P03986 189 aa10.28□□□□□ -0.76
DDB1-218ENST00000540784 LINC00614P0C842 121 aa10.28□□□□□ -0.76
DDB1-218ENST00000540784 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
DDB1-218ENST00000540784 LINC00959A0A1B0GUT2 108 aa10.27□□□□□ -0.77
DDB1-218ENST00000540784 ATP6V1G1O75348 118 aa10.27□□□□□ -0.77
DDB1-218ENST00000540784 RAB5BP61020 215 aa10.27□□□□□ -0.77
DDB1-218ENST00000540784 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
DDB1-218ENST00000540784 SS18Q15532 418 aa10.27□□□□□ -0.77
DDB1-218ENST00000540784 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
DDB1-218ENST00000540784 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.77
DDB1-218ENST00000540784 RNASE13Q5GAN3 156 aaKnown RBP10.26□□□□□ -0.77
DDB1-218ENST00000540784 Q6ZUT4 128 aa10.26□□□□□ -0.77
DDB1-218ENST00000540784 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
DDB1-218ENST00000540784 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 LECT2O14960 151 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 CCL25O15444 150 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 SPATA12Q7Z6I5 190 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 AP5S1Q9NUS5 200 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
DDB1-218ENST00000540784 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
DDB1-218ENST00000540784 LINC01549A6NIU2 74 aa10.24□□□□□ -0.77
DDB1-218ENST00000540784 IGIPA6NJ69 53 aa10.24□□□□□ -0.77
DDB1-218ENST00000540784 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
DDB1-218ENST00000540784 FAM104AQ969W3 186 aa10.24□□□□□ -0.77
DDB1-218ENST00000540784 IGLV4-3A0A075B6K6 122 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 NPSP0C0P6 89 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 XCL1P47992 114 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 WFDC2Q14508 124 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 Q6ZN92 141 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 Q8N814 137 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 VCX2Q9H322 139 aa10.23□□□□□ -0.77
DDB1-218ENST00000540784 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
DDB1-218ENST00000540784 ERASQ7Z444 233 aa10.22□□□□□ -0.77
DDB1-218ENST00000540784 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
DDB1-218ENST00000540784 SVIPQ8NHG7 77 aa10.22□□□□□ -0.77
DDB1-218ENST00000540784 PKD1P98161 4303 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 IFITM10A6NMD0 228 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 USP17L23D6RBM5 183 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 KRTAP10-2P60368 255 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 C14orf177Q52M58 125 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 TEX43Q6ZNM6 134 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
DDB1-218ENST00000540784 FOXI1Q12951 378 aa10.2□□□□□ -0.78
DDB1-218ENST00000540784 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
DDB1-218ENST00000540784 CHCHD1Q96BP2 118 aaKnown RBP10.2□□□□□ -0.78
DDB1-218ENST00000540784 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
DDB1-218ENST00000540784 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
DDB1-218ENST00000540784 EPPK1P58107 5090 aaKnown RBP10.19□□□□□ -0.78
DDB1-218ENST00000540784 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 HBDP02042 147 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 FUSP35637 526 aaKnown RBP eCLIP10.18□□□□□ -0.78
DDB1-218ENST00000540784 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 CDPF1Q6NVV7 123 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 AMELXQ99217 191 aa10.18□□□□□ -0.78
DDB1-218ENST00000540784 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
DDB1-218ENST00000540784 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
DDB1-218ENST00000540784 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
DDB1-218ENST00000540784 A0A096LNJ9 63 aa10.16□□□□□ -0.78
DDB1-218ENST00000540784 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
DDB1-218ENST00000540784 COX7A2LO14548 114 aa10.16□□□□□ -0.78
DDB1-218ENST00000540784 PRSS1P07477 247 aa10.16□□□□□ -0.78
DDB1-218ENST00000540784 HECTD4Q9Y4D8 3996 aa10.16□□□□□ -0.78
DDB1-218ENST00000540784 hDV102S1A0JD36 115 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 HSBP1O75506 76 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 MALP21145 153 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 UBE2D1P51668 147 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 PDZD11Q5EBL8 140 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
DDB1-218ENST00000540784 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
DDB1-218ENST00000540784 ATP5LO75964 103 aa10.14□□□□□ -0.79
DDB1-218ENST00000540784 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms