RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PRR15LQ9BU68 103 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 NPVFQ9HCQ7 196 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 CDC42SE2Q9NRR3 84 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 CRCT1Q9UGL9 99 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 GAPVD1Q14C86 1478 aa0.91□□□□□ -2.26
SNHG1-210ENST00000539303 ATOX1O00244 68 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 UQCR11O14957 56 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 SFT2D2O95562 160 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 APOC3P02656 99 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 FAIMQ9NVQ4 179 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 ARL2-SNX15V9GYD0 113 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 V9GYS6 101 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 ANKRD36BQ8N2N9 1353 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 SHANK2Q9UPX8 1470 aa0.9□□□□□ -2.27
SNHG1-210ENST00000539303 HELZ2Q9BYK8 2649 aaKnown RBP0.9□□□□□ -2.27
SNHG1-210ENST00000539303 NSD3Q9BZ95 1437 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 CDK13Q14004 1512 aaKnown RBP0.89□□□□□ -2.27
SNHG1-210ENST00000539303 TOP2BQ02880 1626 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 MYO7AQ13402 2215 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 KIF21AQ7Z4S6 1674 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 SSC5DA1L4H1 1573 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 TTC37Q6PGP7 1564 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 NDUFC1O43677 76 aa0.89□□□□□ -2.27
SNHG1-210ENST00000539303 FAUP35544 74 aaKnown RBP0.89□□□□□ -2.27
SNHG1-210ENST00000539303 NXT2Q9NPJ8 142 aaKnown RBP0.89□□□□□ -2.27
SNHG1-210ENST00000539303 MYOM1P52179 1685 aa0.88□□□□□ -2.27
SNHG1-210ENST00000539303 BAZ1AQ9NRL2 1556 aaPredicted RBP0.88□□□□□ -2.27
SNHG1-210ENST00000539303 LAMC3Q9Y6N6 1575 aa0.88□□□□□ -2.27
SNHG1-210ENST00000539303 BTAF1O14981 1849 aa0.88□□□□□ -2.27
SNHG1-210ENST00000539303 A0A0G2JND7 137 aa0.88□□□□□ -2.27
SNHG1-210ENST00000539303 AMELXQ99217 191 aa0.88□□□□□ -2.27
SNHG1-210ENST00000539303 SBF2Q86WG5 1849 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 MAGI1Q96QZ7 1491 aaPredicted RBP0.87□□□□□ -2.27
SNHG1-210ENST00000539303 COX17Q14061 63 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 FAM223AQ8IWN6 122 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 SERP2Q8N6R1 65 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 CACFD1Q9UGQ2 172 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 PRDM15P57071 1507 aaPredicted RBP0.87□□□□□ -2.27
SNHG1-210ENST00000539303 ARHGEF5Q12774 1597 aa0.87□□□□□ -2.27
SNHG1-210ENST00000539303 PLEKHH2Q8IVE3 1493 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 PDCD11Q14690 1871 aaKnown RBP0.86□□□□□ -2.27
SNHG1-210ENST00000539303 HMGXB3Q12766 1538 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 A0A0D9SG42 100 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 G3V318 75 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 M0R3E3 92 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 MGPP08493 103 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 IGLC1P0CG04 106 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 ASIPP42127 132 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 TRGV9Q99603 122 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 PROK2Q9HC23 129 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 ADGRL2O95490 1459 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 MLH3Q9UHC1 1453 aa0.86□□□□□ -2.27
SNHG1-210ENST00000539303 EHBP1L1Q8N3D4 1523 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 FAM223BA6NKX1 122 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 PIN1P1O15428 100 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 HAMPP81172 84 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 TROQ12816 1431 aaPredicted RBP0.85□□□□□ -2.27
SNHG1-210ENST00000539303 UBE2DNLQ8IWF7 75 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 RAPGEF2Q9Y4G8 1499 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 WNK3Q9BYP7 1800 aa0.85□□□□□ -2.27
SNHG1-210ENST00000539303 SCN7AQ01118 1682 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 KIAA1551Q9HCM1 1747 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 MARF1Q9Y4F3 1742 aaKnown RBP0.84□□□□□ -2.27
SNHG1-210ENST00000539303 UQCRHLA0A096LP55 91 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 A0A1B0GWA3 101 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 C10orf142B7Z368 130 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 GYPAP02724 150 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 UQCRHP07919 91 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 NMBP08949 121 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 SAA2P0DJI9 122 aaPredicted RBP0.84□□□□□ -2.27
SNHG1-210ENST00000539303 PMCHL1Q16048 86 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 MYO7BQ6PIF6 2116 aa0.84□□□□□ -2.27
SNHG1-210ENST00000539303 ASH1LQ9NR48 2969 aaKnown RBP0.84□□□□□ -2.27
SNHG1-210ENST00000539303 PLXNB2O15031 1838 aa0.84□□□□□ -2.28
SNHG1-210ENST00000539303 COL4A6Q14031 1691 aa0.84□□□□□ -2.28
SNHG1-210ENST00000539303 DIP2CQ9Y2E4 1556 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 KMT2BQ9UMN6 2715 aaPredicted RBP0.83□□□□□ -2.28
SNHG1-210ENST00000539303 TRBV25-1A0A075B6N4 114 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 TRBV7-7A0A0K0K1E9 115 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 PVALEFA0A1B0GWK0 134 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 SYS1-DBNDD2H3BUS1 97 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 H7BZZ5 65 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 PRO1933Q9H354 126 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 LINC00472Q9H8W2 130 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 LRRC37A2A6NM11 1700 aa0.83□□□□□ -2.28
SNHG1-210ENST00000539303 ZNF815PA8K554 130 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 PSMG4Q5JS54 123 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 Q6JHZ5 121 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 C9orf62Q8N4C0 152 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 CADP27708 2225 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 RGPD4Q7Z3J3 1758 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 RB1CC1Q8TDY2 1594 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 RAPGEF6Q8TEU7 1601 aa0.82□□□□□ -2.28
SNHG1-210ENST00000539303 CLTCQ00610 1675 aaKnown RBP0.81□□□□□ -2.28
SNHG1-210ENST00000539303 MON2Q7Z3U7 1717 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 KDM3BQ7LBC6 1761 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 NAV3Q8IVL0 2385 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms