RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HTN3P15516 51 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 CKS2P33552 79 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 NMUP48645 174 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 CRIP1P50238 77 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 ZNF876PQ49A33 203 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 NEGR1Q7Z3B1 354 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 AMN1Q8IY45 258 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 C11orf72Q8NBR9 251 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 MUC7Q8TAX7 377 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 CHAC1Q9BUX1 264 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 EDA2RQ9HAV5 297 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 NXT2Q9NPJ8 142 aaKnown RBP3.05□□□□□ -1.92
SNHG1-208ENST00000538266 MRPL16Q9NX20 251 aaKnown RBP3.05□□□□□ -1.92
SNHG1-208ENST00000538266 CELA1Q9UNI1 258 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 PHLDA3Q9Y5J5 127 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 MEGF8Q7Z7M0 2845 aa3.05□□□□□ -1.92
SNHG1-208ENST00000538266 TRAV10A0A0B4J240 114 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 F5H768 121 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 M0R381 172 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 DPM2O94777 84 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 IGKCP01834 107 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 ATP5G1P05496 136 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 IGLC6P0CF74 106 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 SMIM13P0DJ93 91 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 SCGB1A1P11684 91 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 FCER1GP30273 86 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 TAL2Q16559 108 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 C12orf74Q32Q52 190 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 Q6ZTC4 211 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 Q6ZTI0 123 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 C9orf85Q96MD7 179 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 CNFNQ9BYD5 112 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 KLK5Q9Y337 293 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-208ENST00000538266 TRRAPQ9Y4A5 3859 aa3.04□□□□□ -1.92
SNHG1-208ENST00000538266 DEFB131BA0A096LNP1 70 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 TRGV4A0A0C4DH28 118 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 A8MWV9 139 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 TMEM238C9JI98 176 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 SMKR1H3BMG3 65 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 C3orf84H3BNL1 204 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 J3QR89 54 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 RNASE3P12724 160 aaKnown RBP3.03□□□□□ -1.92
SNHG1-208ENST00000538266 EVI2AP22794 236 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 PLNP26678 52 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 ZFAND6Q6FIF0 208 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 PCP2Q8IVA1 136 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 Q8N8P6 123 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 PHLDA1Q8WV24 401 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-208ENST00000538266 RASL10AQ92737 203 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 RAB37Q96AX2 223 aa3.03□□□□□ -1.92
SNHG1-208ENST00000538266 TRAV4A0A0B4J268 109 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 IGLL5B9A064 214 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 K7ERJ3 54 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 CIDEAO60543 219 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 IGHV3-53P01767 116 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 PRSS1P07477 247 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 FXYD2P54710 66 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 TCTAP57738 103 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 RPL24P83731 157 aaKnown RBP3.02□□□□□ -1.93
SNHG1-208ENST00000538266 CEMP1Q6PRD7 247 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-208ENST00000538266 CEND1Q8N111 149 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 PTH2Q96A98 100 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 RNF185Q96GF1 192 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 C18orf15Q96N68 181 aa3.02□□□□□ -1.93
SNHG1-208ENST00000538266 NAA38Q9BRA0 125 aaKnown RBP3.02□□□□□ -1.93
SNHG1-208ENST00000538266 TRBV25-1A0A075B6N4 114 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 TRAV26-1A0A087WT03 109 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 A0A087WX48 190 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 IGKV2D-26A0A0A0MRZ7 120 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 TRAV12-1A0A0B4J245 112 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 A0A0J9YY99 117 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 E9PLD3 99 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 NXPH4O95158 308 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 MGPP08493 103 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 GAGE5Q13069 117 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 GAGE6Q13070 117 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 LAGE3Q14657 143 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 ZNF56Q15929 161 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 CASC10Q5T4H9 136 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 LYRM7Q5U5X0 104 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 CFAP126Q5VTH2 177 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 C15orf53Q8NAA6 179 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 MRAP2Q96G30 205 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 PRADC1Q9BSG0 188 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-208ENST00000538266 NHP2Q9NX24 153 aaKnown RBP3.01□□□□□ -1.93
SNHG1-208ENST00000538266 PRO0255Q9UI72 69 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 HHLA3Q9XRX5 114 aa3.01□□□□□ -1.93
SNHG1-208ENST00000538266 CHTOPQ9Y3Y2 248 aaKnown RBP3.01□□□□□ -1.93
SNHG1-208ENST00000538266 TENM3Q9P273 2699 aa3□□□□□ -1.93
SNHG1-208ENST00000538266 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
SNHG1-208ENST00000538266 IGLV5-45A0A087WSX0 123 aa3□□□□□ -1.93
SNHG1-208ENST00000538266 IGHV3-73A0A0B4J1V6 119 aa3□□□□□ -1.93
SNHG1-208ENST00000538266 A0A1B0GV72 72 aa3□□□□□ -1.93
SNHG1-208ENST00000538266 A0A1B0GWB2 263 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms