RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 MT-ATP8P03928 68 aa9.46□□□□□ -0.9
LGR5-202ENST00000536515 SETD2Q9BYW2 2564 aaPredicted RBP9.45□□□□□ -0.9
LGR5-202ENST00000536515 NF1P21359 2839 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 CUBNO60494 3623 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 BEAN1Q3B7T3 259 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 ITPR3Q14573 2671 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 CCDC168Q8NDH2 2452 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 RS1O15537 224 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 TRIAP1O43715 76 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 XGP55808 180 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
LGR5-202ENST00000536515 Q6ZSV7 163 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 MIAQ16674 131 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 SPANXCQ9NY87 97 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
LGR5-202ENST00000536515 FLNBO75369 2602 aaKnown RBP9.44□□□□□ -0.9
LGR5-202ENST00000536515 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 LINC01620Q4KN68 170 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.43□□□□□ -0.9
LGR5-202ENST00000536515 DAND5Q8N907 189 aa9.43□□□□□ -0.9
LGR5-202ENST00000536515 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
LGR5-202ENST00000536515 AKAP9Q99996 3911 aa9.42□□□□□ -0.9
LGR5-202ENST00000536515 ZNF469Q96JG9 3925 aaPredicted RBP9.42□□□□□ -0.9
LGR5-202ENST00000536515 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
LGR5-202ENST00000536515 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
LGR5-202ENST00000536515 JMJD1CQ15652 2540 aa9.42□□□□□ -0.9
LGR5-202ENST00000536515 A0A1B0GV72 72 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 COX6A2Q02221 97 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 STHQ8IWL8 128 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
LGR5-202ENST00000536515 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
LGR5-202ENST00000536515 NIPBLQ6KC79 2804 aaeCLIP9.4□□□□□ -0.9
LGR5-202ENST00000536515 CKS1BP61024 79 aa9.4□□□□□ -0.9
LGR5-202ENST00000536515 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.9
LGR5-202ENST00000536515 M0QXV9 152 aa9.4□□□□□ -0.9
LGR5-202ENST00000536515 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
LGR5-202ENST00000536515 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.91
LGR5-202ENST00000536515 FLNAP21333 2647 aaKnown RBP9.39□□□□□ -0.91
LGR5-202ENST00000536515 CIDEAO60543 219 aa9.39□□□□□ -0.91
LGR5-202ENST00000536515 NDUFA7O95182 113 aa9.39□□□□□ -0.91
LGR5-202ENST00000536515 TIRAPP58753 221 aa9.39□□□□□ -0.91
LGR5-202ENST00000536515 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
LGR5-202ENST00000536515 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 NDUFA1O15239 70 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 Q6ZTI0 123 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 ZNF625Q96I27 306 aaPredicted RBP9.38□□□□□ -0.91
LGR5-202ENST00000536515 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
LGR5-202ENST00000536515 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 TMEM262E9PQX1 116 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 TIMM17BO60830 172 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 RPL13AP40429 203 aaKnown RBP9.37□□□□□ -0.91
LGR5-202ENST00000536515 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 CLUHP3Q96NS8 147 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 Q9H8V8 135 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
LGR5-202ENST00000536515 TRAV13-1A0A0B4J241 112 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 CYSRT1A8MQ03 144 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 COX6CP09669 75 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 TEX29Q8N6K0 151 aa9.37□□□□□ -0.91
LGR5-202ENST00000536515 HERVK_113P63121 156 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
LGR5-202ENST00000536515 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
LGR5-202ENST00000536515 TRAV25A0A0B4J276 109 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 DNAJC9-AS1A6NH13 148 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 K7EQD1 137 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 CCL24O00175 119 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 IFITM1P13164 125 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
LGR5-202ENST00000536515 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 H7C423 109 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 GAGE4Q13068 117 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 GAGE5Q13069 117 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
LGR5-202ENST00000536515 RNF183Q96D59 192 aa9.35□□□□□ -0.91
LGR5-202ENST00000536515 NOP10Q9NPE3 64 aaKnown RBP9.34□□□□□ -0.91
LGR5-202ENST00000536515 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
LGR5-202ENST00000536515 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
LGR5-202ENST00000536515 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
LGR5-202ENST00000536515 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
LGR5-202ENST00000536515 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
LGR5-202ENST00000536515 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
LGR5-202ENST00000536515 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
LGR5-202ENST00000536515 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
LGR5-202ENST00000536515 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
LGR5-202ENST00000536515 ESM1Q9NQ30 184 aa9.33□□□□□ -0.92
LGR5-202ENST00000536515 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms