RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF876PQ49A33 203 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 SAMD13Q5VXD3 122 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 CYSLTR1Q9Y271 337 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 RPL32P62910 135 aaKnown RBP5.82□□□□□ -1.48
NEDD8-207ENST00000533242 FOXI2Q6ZQN5 318 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 ZNRF2Q8NHG8 242 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 TRBV6-5A0A0K0K1A5 114 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 MYMXA0A1B0GTQ4 84 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 E9PLD3 99 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 MIFP14174 115 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 OCIAD2Q56VL3 154 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 RYR1P21817 5038 aa5.82□□□□□ -1.48
NEDD8-207ENST00000533242 TRAV2A0A0B4J234 112 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 H3BMM0 161 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 VCYO14598 125 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 PPP1R17O96001 155 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 RNF151Q2KHN1 245 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 Q6ZTC4 211 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 SPCS1Q9Y6A9 102 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 Q6ZSN1 163 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 HIST1H4GQ99525 98 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 KIR2DL4Q99706 377 aa5.81□□□□□ -1.48
NEDD8-207ENST00000533242 C12orf74Q32Q52 190 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 FAM104AQ969W3 186 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 ZNF815PA8K554 130 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 A8MTW9 85 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 M0R2N4 97 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 PMVKQ15126 192 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 SYT8Q8NBV8 401 aa5.8□□□□□ -1.48
NEDD8-207ENST00000533242 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
NEDD8-207ENST00000533242 DEFB131BA0A096LNP1 70 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 GIG44P09565 113 aaPredicted RBP5.79□□□□□ -1.48
NEDD8-207ENST00000533242 GTF2H5Q6ZYL4 71 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 TRPT1Q86TN4 253 aaKnown RBP5.79□□□□□ -1.48
NEDD8-207ENST00000533242 STHQ8IWL8 128 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 AMELXQ99217 191 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 TIMM17AQ99595 171 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 X6R8D5 127 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 FABP2P12104 132 aa5.79□□□□□ -1.48
NEDD8-207ENST00000533242 DNAH11Q96DT5 4516 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 TAL2Q16559 108 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 TMEM170BQ5T4T1 132 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 Q6ZR54 194 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 MTURNQ8N3F0 131 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 C20orf203Q8NBC4 194 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
NEDD8-207ENST00000533242 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 IGHV3-64A0A075B6Q5 118 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 RNASE13Q5GAN3 156 aaKnown RBP5.77□□□□□ -1.49
NEDD8-207ENST00000533242 C11orf72Q8NBR9 251 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 CELA1Q9UNI1 258 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 CBY1Q9Y3M2 126 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 A0A0J9YY99 117 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 A0A1B0GWB2 263 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 AZU1P20160 251 aa5.77□□□□□ -1.49
NEDD8-207ENST00000533242 MRPL16Q9NX20 251 aaKnown RBP5.77□□□□□ -1.49
NEDD8-207ENST00000533242 A0A0J9YXV3 536 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 I3L3M4 83 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 CDK2AP2O75956 126 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 PCP4P48539 62 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 CSNK1G2-AS1Q8NCQ2 148 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 ZNF479Q96JC4 524 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 H3BMG7 143 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 RHOHQ15669 191 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 SFTA2Q6UW10 78 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 UBE2DNLQ8IWF7 75 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 XCL2Q9UBD3 114 aa5.76□□□□□ -1.49
NEDD8-207ENST00000533242 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 ZNF22P17026 224 aaPredicted RBP5.75□□□□□ -1.49
NEDD8-207ENST00000533242 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 NFE4Q86UQ8 179 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 OR5A1Q8NGJ0 315 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 M0R2P5 195 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 EIF4EBP3O60516 100 aaPredicted RBP5.75□□□□□ -1.49
NEDD8-207ENST00000533242 UBE2D1P51668 147 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 WFDC2Q14508 124 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 C1orf134Q5TEV5 83 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 LINC01587Q99440 93 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 PKD1P98161 4303 aa5.75□□□□□ -1.49
NEDD8-207ENST00000533242 TEX48A0A1B0GUV7 120 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 TMEM223A0PJW6 202 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 J3QQQ9 107 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 SRSF9Q13242 221 aaKnown RBP eCLIP5.74□□□□□ -1.49
NEDD8-207ENST00000533242 VPS25Q9BRG1 176 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 PGPEP1Q9NXJ5 209 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 DNAH2Q9P225 4427 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.74□□□□□ -1.49
NEDD8-207ENST00000533242 IGHV3OR16-12A0A075B7B8 117 aa5.74□□□□□ -1.49
NEDD8-207ENST00000533242 IGKV2-29A2NJV5 120 aaPredicted RBP5.74□□□□□ -1.49
NEDD8-207ENST00000533242 LINC01549A6NIU2 74 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms