RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 IGLV10-54A0A075B6I4 117 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 RAB5AP20339 215 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
SSBP3-214ENST00000533209 RPL39P62891 51 aaKnown RBP7.91□□□□□ -1.14
SSBP3-214ENST00000533209 Q8N8P6 123 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 ALKBH7Q9BT30 221 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-214ENST00000533209 TIMM21Q9BVV7 248 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
SSBP3-214ENST00000533209 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 PGPEP1Q9NXJ5 209 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 UBE2D4Q9Y2X8 147 aa7.91□□□□□ -1.14
SSBP3-214ENST00000533209 CSDC2Q9Y534 153 aaKnown RBP7.91□□□□□ -1.14
SSBP3-214ENST00000533209 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 IGKV3OR2-268A0A0C4DH90 116 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 C16orf90A8MZG2 172 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 FABP9Q0Z7S8 132 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 CBLN2Q8IUK8 224 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 Q8N814 137 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 TMEM18Q96B42 140 aa7.9□□□□□ -1.14
SSBP3-214ENST00000533209 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
SSBP3-214ENST00000533209 DGAT2L7PQ6IED9 249 aa7.89□□□□□ -1.15
SSBP3-214ENST00000533209 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
SSBP3-214ENST00000533209 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
SSBP3-214ENST00000533209 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
SSBP3-214ENST00000533209 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
SSBP3-214ENST00000533209 KIAA1109Q2LD37 5005 aa7.88□□□□□ -1.15
SSBP3-214ENST00000533209 IFI27P40305 119 aaPredicted RBP7.88□□□□□ -1.15
SSBP3-214ENST00000533209 Q6ZUT4 128 aa7.88□□□□□ -1.15
SSBP3-214ENST00000533209 SMCO4Q9NRQ5 59 aa7.88□□□□□ -1.15
SSBP3-214ENST00000533209 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
SSBP3-214ENST00000533209 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
SSBP3-214ENST00000533209 USP17L23D6RBM5 183 aa7.87□□□□□ -1.15
SSBP3-214ENST00000533209 K7EMI3 77 aa7.87□□□□□ -1.15
SSBP3-214ENST00000533209 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
SSBP3-214ENST00000533209 NTN5Q8WTR8 489 aaPredicted RBP7.87□□□□□ -1.15
SSBP3-214ENST00000533209 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
SSBP3-214ENST00000533209 SPANXA1Q9NS26 97 aa7.87□□□□□ -1.15
SSBP3-214ENST00000533209 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
SSBP3-214ENST00000533209 MRPS36P82909 103 aaKnown RBP7.86□□□□□ -1.15
SSBP3-214ENST00000533209 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
SSBP3-214ENST00000533209 OPRPNQ99935 248 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-214ENST00000533209 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
SSBP3-214ENST00000533209 IGLV5-52A0A0A0MRZ9 124 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 CCL25O15444 150 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 PYGO1Q9Y3Y4 419 aa7.85□□□□□ -1.15
SSBP3-214ENST00000533209 HERC2O95714 4834 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 PRSS1P07477 247 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 XCL1P47992 114 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 FOXI1Q12951 378 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 SS18Q15532 418 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 C14orf177Q52M58 125 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 CYSLTR1Q9Y271 337 aa7.84□□□□□ -1.15
SSBP3-214ENST00000533209 RYR1P21817 5038 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 TRAV13-1A0A0B4J241 112 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 GCSHP23434 173 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 C18orf32Q8TCD1 76 aa7.83□□□□□ -1.16
SSBP3-214ENST00000533209 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
SSBP3-214ENST00000533209 IGIPA6NJ69 53 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 C1orf196B1AJZ1 125 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 FA2HQ7L5A8 372 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 C15orf56Q8N910 161 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
SSBP3-214ENST00000533209 G0S2P27469 103 aa7.81□□□□□ -1.16
SSBP3-214ENST00000533209 URB1-AS1Q96HZ7 61 aa7.81□□□□□ -1.16
SSBP3-214ENST00000533209 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
SSBP3-214ENST00000533209 IFITM10A6NMD0 228 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 COLCA2A8K830 154 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 CDK2AP2O75956 126 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 NPSP0C0P6 89 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 CFAP161Q6P656 301 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 LINC00173Q6ZV60 143 aa7.8□□□□□ -1.16
SSBP3-214ENST00000533209 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 SCO1O75880 301 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 TRGC2P03986 189 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 LINC01620Q4KN68 170 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 ZC2HC1BQ5TFG8 222 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 AMELXQ99217 191 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 TIMM17AQ99595 171 aa7.79□□□□□ -1.16
SSBP3-214ENST00000533209 COX7A2LO14548 114 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 SLPIP03973 132 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 LINC00614P0C842 121 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
SSBP3-214ENST00000533209 HIGD2BQ4VC39 106 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 TEX43Q6ZNM6 134 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 ERASQ7Z444 233 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
SSBP3-214ENST00000533209 A0A096LNJ9 63 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 GVQW2A0A096LPI5 108 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-214ENST00000533209 IGHV3OR16-9A0A0B4J2B5 98 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 LINC01549A6NIU2 74 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 UBE2D1P51668 147 aa7.77□□□□□ -1.17
SSBP3-214ENST00000533209 LINC00242Q5T6M2 205 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms