RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 TIRAPP58753 221 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 RPL36AP83881 106 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 TMEM170BQ5T4T1 132 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 AMMECR1LQ6DCA0 310 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 HIST2H2BDQ6DRA6 164 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 Q6ZVH6 145 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 SLC25A29Q8N8R3 303 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 ZNRF2Q8NHG8 242 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 RPL36ALQ969Q0 106 aaKnown RBP4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 GTSF1LQ9H1H1 148 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 XCL2Q9UBD3 114 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 UBE2D4Q9Y2X8 147 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 CUBNO60494 3623 aa4.1□□□□□ -1.75
ATPAF1-210ENST00000532925 TRBV6-4A0A1B0GX49 114 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 A0A1W2PRX2 142 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 TMEM238C9JI98 176 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 GIG44P09565 113 aaPredicted RBP4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 C12orf74Q32Q52 190 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 CSNK1G2-AS1Q8NCQ2 148 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 KIR2DL5BQ8NHK3 375 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 FAM104AQ969W3 186 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 RNF183Q96D59 192 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 SMR3AQ99954 134 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 PPDPFQ9H3Y8 114 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 MRPL16Q9NX20 251 aaKnown RBP4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 NHP2Q9NX24 153 aaKnown RBP4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 SPCS1Q9Y6A9 102 aa4.09□□□□□ -1.75
ATPAF1-210ENST00000532925 TRGV1A0A0A0MS02 117 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 GAGE12BA1L429 117 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 SMIM9A6NGZ8 99 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 IGLL5B9A064 214 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 TIMM17BO60830 172 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 HTN1P15515 57 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 TCTAP57738 103 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 UBE2D3P61077 147 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 UBE2D2P62837 147 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 RRN3P1Q2M238 152 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 C9orf66Q5T8R8 295 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 HELZ2Q9BYK8 2649 aaKnown RBP4.08□□□□□ -1.76
ATPAF1-210ENST00000532925 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 A0A0B4J2C4 111 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 A0A0J9YXV3 536 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 A0A0J9YXY3 114 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 K7ERU9 68 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 LY6G6DO95868 133 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV3-30P01768 117 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 LINC00694P0DN24 101 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV3-30-5P0DP03 117 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 TSPEAR-AS2P59090 65 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 HERVK_113P63121 156 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 RPL24P83731 157 aaKnown RBP4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 SRSF9Q13242 221 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 SBSPONQ8IVN8 264 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 SPANXDQ9BXN6 97 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 SPANXCQ9NY87 97 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 ACANP16112 2415 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 ITPR2Q14571 2701 aa4.07□□□□□ -1.76
ATPAF1-210ENST00000532925 MTORP42345 2549 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 F8W1H4 67 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV3-30-3P0DP02 117 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 IFITM1P13164 125 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 MALP21145 153 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 KRTAP10-3P60369 221 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 OCIAD2Q56VL3 154 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 Q6ZTI0 123 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 Q6ZUT4 128 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 RAB37Q96AX2 223 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 VSIG2Q96IQ7 327 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 GEMIN7Q9H840 131 aaKnown RBP4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 CBY1Q9Y3M2 126 aa4.06□□□□□ -1.76
ATPAF1-210ENST00000532925 TRBV20-1A0A075B6N2 111 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 IGHV3OR16-12A0A075B7B8 117 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 NDUFA1O15239 70 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 EMP1P54849 157 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 DGAT2L7PQ6IED9 249 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 C10orf126Q8N4M7 172 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 OPRPNQ99935 248 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 CITED1Q99966 193 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 TMEM243Q9BU79 118 aa4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 NOP10Q9NPE3 64 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-210ENST00000532925 TRGV2A0A075B6R0 118 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 K7ERJ3 54 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 M0QXV9 152 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 CRLF1O75462 422 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 PRM2P04554 102 aa4.04□□□□□ -1.76
ATPAF1-210ENST00000532925 RBX1P62877 108 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms