RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ALKBH7Q9BT30 221 aaPredicted RBP16.45■□□□□ 0.22
USP48-214ENST00000532737 DYNC1H1Q14204 4646 aaKnown RBP16.44■□□□□ 0.22
USP48-214ENST00000532737 WFDC2Q14508 124 aa16.44■□□□□ 0.22
USP48-214ENST00000532737 KRTAP26-1Q6PEX3 210 aa16.44■□□□□ 0.22
USP48-214ENST00000532737 SPATA12Q7Z6I5 190 aa16.44■□□□□ 0.22
USP48-214ENST00000532737 UBE2D4Q9Y2X8 147 aa16.44■□□□□ 0.22
USP48-214ENST00000532737 EREGO14944 169 aa16.43■□□□□ 0.22
USP48-214ENST00000532737 KRTAP10-2P60368 255 aa16.43■□□□□ 0.22
USP48-214ENST00000532737 RPL39P62891 51 aaKnown RBP16.43■□□□□ 0.22
USP48-214ENST00000532737 BAALCQ8WXS3 180 aa16.43■□□□□ 0.22
USP48-214ENST00000532737 TRAPPC1Q9Y5R8 145 aa16.43■□□□□ 0.22
USP48-214ENST00000532737 RYR1P21817 5038 aa16.42■□□□□ 0.22
USP48-214ENST00000532737 IGLV10-54A0A075B6I4 117 aa16.42■□□□□ 0.22
USP48-214ENST00000532737 TMEM18Q96B42 140 aa16.42■□□□□ 0.22
USP48-214ENST00000532737 CDC42SE2Q9NRR3 84 aa16.42■□□□□ 0.22
USP48-214ENST00000532737 IGKV3OR2-268A0A0C4DH90 116 aa16.41■□□□□ 0.22
USP48-214ENST00000532737 LECT2O14960 151 aa16.41■□□□□ 0.22
USP48-214ENST00000532737 IFI27P40305 119 aaPredicted RBP16.41■□□□□ 0.22
USP48-214ENST00000532737 DGAT2L7PQ6IED9 249 aa16.41■□□□□ 0.22
USP48-214ENST00000532737 NXT2Q9NPJ8 142 aaKnown RBP16.41■□□□□ 0.22
USP48-214ENST00000532737 TRAV8-4A0A0B4J246 113 aa16.4■□□□□ 0.22
USP48-214ENST00000532737 TIMM21Q9BVV7 248 aa16.4■□□□□ 0.22
USP48-214ENST00000532737 CSDC2Q9Y534 153 aaKnown RBP16.4■□□□□ 0.22
USP48-214ENST00000532737 FUSP35637 526 aaKnown RBP eCLIP16.39■□□□□ 0.21
USP48-214ENST00000532737 ZNF664Q8N3J9 261 aa16.39■□□□□ 0.21
USP48-214ENST00000532737 SMAGPQ0VAQ4 97 aa16.38■□□□□ 0.21
USP48-214ENST00000532737 K7EMI3 77 aa16.36■□□□□ 0.21
USP48-214ENST00000532737 Q8N814 137 aa16.36■□□□□ 0.21
USP48-214ENST00000532737 PRSS3P2Q8NHM4 247 aa16.36■□□□□ 0.21
USP48-214ENST00000532737 FAM104AQ969W3 186 aa16.36■□□□□ 0.21
USP48-214ENST00000532737 ORMDL2Q53FV1 153 aa16.35■□□□□ 0.21
USP48-214ENST00000532737 RNASE13Q5GAN3 156 aaKnown RBP16.35■□□□□ 0.21
USP48-214ENST00000532737 Q6ZUT4 128 aa16.35■□□□□ 0.21
USP48-214ENST00000532737 SPANXA1Q9NS26 97 aa16.35■□□□□ 0.21
USP48-214ENST00000532737 PGPEP1Q9NXJ5 209 aa16.35■□□□□ 0.21
USP48-214ENST00000532737 OPRPNQ99935 248 aaPredicted RBP16.34■□□□□ 0.21
USP48-214ENST00000532737 LINC00959A0A1B0GUT2 108 aa16.33■□□□□ 0.2
USP48-214ENST00000532737 C16orf90A8MZG2 172 aa16.33■□□□□ 0.2
USP48-214ENST00000532737 CHCHD10Q8WYQ3 142 aaPredicted RBP16.33■□□□□ 0.2
USP48-214ENST00000532737 GAGE12HA6NDE8 117 aa16.32■□□□□ 0.2
USP48-214ENST00000532737 C2orf66Q6UXQ4 117 aa16.32■□□□□ 0.2
USP48-214ENST00000532737 CYSLTR1Q9Y271 337 aa16.31■□□□□ 0.2
USP48-214ENST00000532737 LINC01546A6NGU7 62 aa16.3■□□□□ 0.2
USP48-214ENST00000532737 USP17L23D6RBM5 183 aa16.3■□□□□ 0.2
USP48-214ENST00000532737 MRPS36P82909 103 aaKnown RBP16.3■□□□□ 0.2
USP48-214ENST00000532737 C18orf32Q8TCD1 76 aa16.3■□□□□ 0.2
USP48-214ENST00000532737 PYGO1Q9Y3Y4 419 aa16.3■□□□□ 0.2
USP48-214ENST00000532737 DNAH5Q8TE73 4624 aa16.3■□□□□ 0.2
USP48-214ENST00000532737 SCO1O75880 301 aa16.29■□□□□ 0.2
USP48-214ENST00000532737 COLCA2A8K830 154 aa16.28■□□□□ 0.2
USP48-214ENST00000532737 CCL25O15444 150 aa16.28■□□□□ 0.2
USP48-214ENST00000532737 SS18Q15532 418 aa16.28■□□□□ 0.2
USP48-214ENST00000532737 CDPF1Q6NVV7 123 aa16.28■□□□□ 0.2
USP48-214ENST00000532737 FA2HQ7L5A8 372 aa16.28■□□□□ 0.2
USP48-214ENST00000532737 XCL1P47992 114 aa16.27■□□□□ 0.2
USP48-214ENST00000532737 NTN5Q8WTR8 489 aaPredicted RBP16.27■□□□□ 0.2
USP48-214ENST00000532737 ABCA13Q86UQ4 5058 aa16.27■□□□□ 0.2
USP48-214ENST00000532737 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.26■□□□□ 0.19
USP48-214ENST00000532737 IGLV4-3A0A075B6K6 122 aa16.26■□□□□ 0.19
USP48-214ENST00000532737 TRAV13-1A0A0B4J241 112 aa16.26■□□□□ 0.19
USP48-214ENST00000532737 FOXI1Q12951 378 aa16.26■□□□□ 0.19
USP48-214ENST00000532737 URB1-AS1Q96HZ7 61 aa16.26■□□□□ 0.19
USP48-214ENST00000532737 IGLV5-52A0A0A0MRZ9 124 aa16.25■□□□□ 0.19
USP48-214ENST00000532737 IGIPA6NJ69 53 aa16.25■□□□□ 0.19
USP48-214ENST00000532737 LRP1BQ9NZR2 4599 aa16.25■□□□□ 0.19
USP48-214ENST00000532737 C1orf196B1AJZ1 125 aa16.24■□□□□ 0.19
USP48-214ENST00000532737 G0S2P27469 103 aa16.24■□□□□ 0.19
USP48-214ENST00000532737 C14orf177Q52M58 125 aa16.24■□□□□ 0.19
USP48-214ENST00000532737 TOMM6Q96B49 74 aa16.24■□□□□ 0.19
USP48-214ENST00000532737 TRGC2P03986 189 aa16.23■□□□□ 0.19
USP48-214ENST00000532737 PRSS1P07477 247 aa16.23■□□□□ 0.19
USP48-214ENST00000532737 KRTAP4-5Q9BYR2 181 aa16.23■□□□□ 0.19
USP48-214ENST00000532737 CD164L2Q6UWJ8 174 aa16.22■□□□□ 0.19
USP48-214ENST00000532737 TMEM141Q96I45 108 aa16.22■□□□□ 0.19
USP48-214ENST00000532737 HSPG2P98160 4391 aa16.22■□□□□ 0.19
USP48-214ENST00000532737 IFITM10A6NMD0 228 aa16.21■□□□□ 0.19
USP48-214ENST00000532737 LINC00614P0C842 121 aa16.21■□□□□ 0.19
USP48-214ENST00000532737 AP5S1Q9NUS5 200 aa16.21■□□□□ 0.19
USP48-214ENST00000532737 ZC2HC1BQ5TFG8 222 aa16.2■□□□□ 0.18
USP48-214ENST00000532737 NPSP0C0P6 89 aa16.19■□□□□ 0.18
USP48-214ENST00000532737 GCSHP23434 173 aa16.19■□□□□ 0.18
USP48-214ENST00000532737 KRTAP10-1P60331 282 aa16.19■□□□□ 0.18
USP48-214ENST00000532737 C15orf56Q8N910 161 aa16.19■□□□□ 0.18
USP48-214ENST00000532737 LINC00173Q6ZV60 143 aa16.18■□□□□ 0.18
USP48-214ENST00000532737 SCGB3A1Q96QR1 104 aa16.18■□□□□ 0.18
USP48-214ENST00000532737 TIMM17AQ99595 171 aa16.18■□□□□ 0.18
USP48-214ENST00000532737 CFAP161Q6P656 301 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 Q6ZN92 141 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 TEX43Q6ZNM6 134 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 ERASQ7Z444 233 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 AMELXQ99217 191 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 VCX2Q9H322 139 aa16.17■□□□□ 0.18
USP48-214ENST00000532737 A0A096LNJ9 63 aa16.16■□□□□ 0.18
USP48-214ENST00000532737 hDV102S1A0JD36 115 aa16.16■□□□□ 0.18
USP48-214ENST00000532737 RAB5BP61020 215 aa16.16■□□□□ 0.18
USP48-214ENST00000532737 LINC01549A6NIU2 74 aa16.14■□□□□ 0.17
USP48-214ENST00000532737 COX7A2LO14548 114 aa16.14■□□□□ 0.17
USP48-214ENST00000532737 LINC01620Q4KN68 170 aa16.14■□□□□ 0.17
USP48-214ENST00000532737 HIGD2BQ4VC39 106 aa16.14■□□□□ 0.17
USP48-214ENST00000532737 C5orf38Q86SI9 138 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms