RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MPC1Q9Y5U8 109 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 SSPOA2VEC9 5147 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 MYH6P13533 1939 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 WNK2Q9Y3S1 2297 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 LOC107984156A0A0G2JMH3 177 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 LOC107986453A0A1B0GWG9 222 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 ZNF727A8MUV8 499 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 UQCRQO14949 82 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 DPM2O94777 84 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 EFNA4P52798 201 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 NEDD8Q15843 81 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 C6orf52Q5T4I8 152 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 CASC2Q6XLA1 102 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 ARL17AQ8IVW1 177 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 AIF1LQ9BQI0 150 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 LIMD2Q9BT23 127 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 DSPPQ9NZW4 1301 aa0.79□□□□□ -2.28
CD44-234ENST00000531873 TRAV23DV6A0A075B6W5 121 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 BORCS7-ASMTA0A0B4J1R7 106 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 TMEM189A5PLL7 270 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 NCR3O14931 201 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 CD14P08571 375 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 PAEPP09466 180 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 CMPK1P30085 196 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 SPATA45Q537H7 98 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 IZUMO2Q6UXV1 221 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 Q8N6K4 173 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 OR10AC1Q8NH08 325 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 CIB3Q96Q77 187 aaPredicted RBP0.78□□□□□ -2.28
CD44-234ENST00000531873 CCL19Q99731 98 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 ABCA1O95477 2261 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 PLIN4Q96Q06 1357 aa0.78□□□□□ -2.28
CD44-234ENST00000531873 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.29
CD44-234ENST00000531873 PRKDCP78527 4128 aaKnown RBP0.77□□□□□ -2.29
CD44-234ENST00000531873 APODP05090 189 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 PDE6GP18545 87 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 FXYD4P59646 89 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 CCDC153Q494R4 210 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 OCIAD2Q56VL3 154 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 LINC00299Q6ZSB3 139 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 TCTE3Q8IZS6 198 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 OTOSQ8NHW6 89 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 TCEAL4Q96EI5 215 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 SPANXCQ9NY87 97 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 HSPB8Q9UJY1 196 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 F5P12259 2224 aa0.77□□□□□ -2.29
CD44-234ENST00000531873 HMCN2Q8NDA2 5059 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 LAMB1P07942 1786 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 A6NN06 94 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 OR2H2O95918 312 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 IGHV3-30P01768 117 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 STATHP02808 62 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 IGHV3-30-5P0DP03 117 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 GTF2A1P52655 376 aaPredicted RBP0.76□□□□□ -2.29
CD44-234ENST00000531873 PSPHP78330 225 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 QRFPP83859 136 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 MORN2Q502X0 79 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 HSD17B12Q53GQ0 312 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 LELP1Q5T871 98 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 CSAG1Q6PB30 78 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 TMEM91Q6ZNR0 172 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 LPAR5Q9H1C0 372 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 DNAJC15Q9Y5T4 150 aa0.76□□□□□ -2.29
CD44-234ENST00000531873 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 DOCK2Q92608 1830 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CACNA1CQ13936 2221 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 A0A1W2PPB8 328 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 A0A1W2PRS3 328 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 KIR3DP1A8MWS1 328 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 DBIP07108 87 aaKnown RBP0.75□□□□□ -2.29
CD44-234ENST00000531873 CKS2P33552 79 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 ETV6P41212 452 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 AKR1D1P51857 326 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 DNAJB13P59910 316 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CKS1BP61024 79 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 LSM3P62310 102 aaKnown RBP0.75□□□□□ -2.29
CD44-234ENST00000531873 SNRPD3P62318 126 aaKnown RBP0.75□□□□□ -2.29
CD44-234ENST00000531873 ASB16-AS1Q495Z4 193 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CCSMST1Q4G0I0 132 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 TCTEX1D1Q8N7M0 179 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 FDCSPQ8NFU4 85 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CALML5Q9NZT1 146 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 GSKIPQ9P0R6 139 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 PATJQ8NI35 1801 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 A0A1B0GUL6 1792 aa0.75□□□□□ -2.29
CD44-234ENST00000531873 CADP27708 2225 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 PLXNB2O15031 1838 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 IGHV1-24A0A0C4DH33 117 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 IFITM5A6NNB3 132 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 EDF1O60869 148 aaKnown RBP0.74□□□□□ -2.29
CD44-234ENST00000531873 CD3DP04234 171 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 UQCRHP07919 91 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 PCBD1P61457 104 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 SPCS2Q15005 226 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 Q6ZS92 163 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 C10orf111Q8N326 155 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 OR4S1Q8NGB4 309 aa0.74□□□□□ -2.29
CD44-234ENST00000531873 COMMD3Q9UBI1 195 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms