RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 Q9H8V8 135 aa5.61□□□□□ -1.51
PTPRK-219ENST00000531050 PIK3CD-AS1Q5SR53 167 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 IGFL3Q6UXB1 125 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 CDKN2A-AS1Q9UH64 79 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 TRAV10A0A0B4J240 114 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 PLAC8L1A1L4L8 177 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-219ENST00000531050 UNQ9165/PRO28630Q6UXU0 137 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-219ENST00000531050 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 OTOGLQ3ZCN5 2332 aa5.6□□□□□ -1.51
PTPRK-219ENST00000531050 C22orf34Q6ZV56 151 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 U3KQE9 123 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 PAX4O43316 350 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 NDUFC1O43677 76 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 LOC400499M0QZD8 3231 aa5.59□□□□□ -1.51
PTPRK-219ENST00000531050 IGLV5-45A0A087WSX0 123 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 IGLV5-39A0A0G2JS06 123 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 LINC00337Q8N6G1 96 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 WNK2Q9Y3S1 2297 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 F6UB75 175 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 LECT2O14960 151 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 SLPIP03973 132 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 CCL17Q92583 94 aa5.58□□□□□ -1.52
PTPRK-219ENST00000531050 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
PTPRK-219ENST00000531050 PF4P02776 101 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 KAAG1Q9UBP8 84 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 IGKV2-28A0A075B6P5 120 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 IGKV2D-28P01615 120 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 CCDC140Q96MF4 163 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 PTPRQQ9UMZ3 2332 aa5.57□□□□□ -1.52
PTPRK-219ENST00000531050 CRPP02741 224 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 COX6A2Q02221 97 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 EP300Q09472 2414 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-219ENST00000531050 TRBV7-4A0A0J9YYF1 115 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 H0YGX0 51 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 MIFP14174 115 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 CLEC19AQ6UXS0 136 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 DMXL2Q8TDJ6 3036 aa5.56□□□□□ -1.52
PTPRK-219ENST00000531050 KLLNB2CW77 178 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 KLK9Q9UKQ9 250 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 DMXL1Q9Y485 3027 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 POLEQ07864 2286 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 A0A087WZ39 114 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 IGHV3-16A0A0C4DH30 117 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 ESRGQ1W209 222 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 C6orf223Q8N319 242 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 CHCHD7Q9BUK0 85 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 TACC2O95359 2948 aa5.55□□□□□ -1.52
PTPRK-219ENST00000531050 TM2D3Q9BRN9 247 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 RIF1Q5UIP0 2472 aaKnown RBP5.54□□□□□ -1.52
PTPRK-219ENST00000531050 ZNF292O60281 2723 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 ASPMQ8IZT6 3477 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-219ENST00000531050 IGHV7-81A0A0B4J1V7 117 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 RPL36AP83881 106 aaKnown RBP5.54□□□□□ -1.52
PTPRK-219ENST00000531050 RPL36ALQ969Q0 106 aaKnown RBP5.54□□□□□ -1.52
PTPRK-219ENST00000531050 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 ABCA4P78363 2273 aa5.54□□□□□ -1.52
PTPRK-219ENST00000531050 IGHV3-38A0A0C4DH36 116 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 BSPH1Q075Z2 132 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 Q6ZTI0 123 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 CEP250Q9BV73 2442 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 KLK9Q2XQG4 91 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 DPM3Q9P2X0 92 aa5.53□□□□□ -1.52
PTPRK-219ENST00000531050 CNOT1A5YKK6 2376 aaKnown RBP5.52□□□□□ -1.53
PTPRK-219ENST00000531050 JMJD7-PLA2G4BH0Y9G9 81 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 LINC00467Q9BRT7 94 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 GVINP1Q7Z2Y8 2422 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-219ENST00000531050 LINC00242Q5T6M2 205 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 Q8N6K4 173 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 SND1-IT1Q9HBX3 110 aa5.52□□□□□ -1.53
PTPRK-219ENST00000531050 Q8NA96 180 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 Q9UF83 564 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 PTPRZ1P23471 2315 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-219ENST00000531050 ROS1P08922 2347 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 IGHV3OR16-12A0A075B7B8 117 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 PROK1P58294 105 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 DAD1P61803 113 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 ECSCRQ19T08 205 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 Q6ZTC4 211 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
PTPRK-219ENST00000531050 BOD1L1Q8NFC6 3051 aa5.5□□□□□ -1.53
PTPRK-219ENST00000531050 ODF3BA8MYP8 253 aa5.5□□□□□ -1.53
PTPRK-219ENST00000531050 AKAP13Q12802 2813 aa5.5□□□□□ -1.53
PTPRK-219ENST00000531050 IGHV1OR15-1A0A075B7D0 117 aa5.5□□□□□ -1.53
PTPRK-219ENST00000531050 IGHV3-73A0A0B4J1V6 119 aa5.49□□□□□ -1.53
PTPRK-219ENST00000531050 C4orf48Q5BLP8 95 aa5.49□□□□□ -1.53
PTPRK-219ENST00000531050 Q8N3U1 123 aa5.49□□□□□ -1.53
PTPRK-219ENST00000531050 E7EQL1 145 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms